RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 PAPSS1O43252 624 aaPredicted RBP13□□□□□ -0.33
SDHA-216ENST00000514027 CBX6O95503 412 aa13□□□□□ -0.33
SDHA-216ENST00000514027 TGM2P21980 687 aa13□□□□□ -0.33
SDHA-216ENST00000514027 SKIV2L2P42285 1042 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 ATXN1P54253 815 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 USP46P62068 366 aa13□□□□□ -0.33
SDHA-216ENST00000514027 CCNA1P78396 465 aa13□□□□□ -0.33
SDHA-216ENST00000514027 SNAPC2Q13487 334 aa13□□□□□ -0.33
SDHA-216ENST00000514027 IRF5Q13568 498 aa13□□□□□ -0.33
SDHA-216ENST00000514027 STILQ15468 1287 aa13□□□□□ -0.33
SDHA-216ENST00000514027 ZNF792Q3KQV3 632 aa13□□□□□ -0.33
SDHA-216ENST00000514027 TAF1BQ53T94 588 aaPredicted RBP13□□□□□ -0.33
SDHA-216ENST00000514027 SMYD5Q6GMV2 418 aa13□□□□□ -0.33
SDHA-216ENST00000514027 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
SDHA-216ENST00000514027 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
SDHA-216ENST00000514027 ENDOVQ8N8Q3 282 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 SHCBP1Q8NEM2 672 aa13□□□□□ -0.33
SDHA-216ENST00000514027 SLC44A1Q8WWI5 657 aa13□□□□□ -0.33
SDHA-216ENST00000514027 ALKBH8Q96BT7 664 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 EIF2AQ9BY44 585 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 DHX35Q9H5Z1 703 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 MANSC1Q9H8J5 431 aa13□□□□□ -0.33
SDHA-216ENST00000514027 ETNK2Q9NVF9 386 aa13□□□□□ -0.33
SDHA-216ENST00000514027 ZC3H7BQ9UGR2 993 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
SDHA-216ENST00000514027 WDR37Q9Y2I8 494 aa13□□□□□ -0.33
SDHA-216ENST00000514027 LRCH1Q9Y2L9 728 aa13□□□□□ -0.33
SDHA-216ENST00000514027 NME7Q9Y5B8 376 aa13□□□□□ -0.33
SDHA-216ENST00000514027 PLXNB2O15031 1838 aa13□□□□□ -0.33
SDHA-216ENST00000514027 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.99□□□□□ -0.33
SDHA-216ENST00000514027 A8MXQ7 604 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 F5H423 210 aaPredicted RBP12.99□□□□□ -0.33
SDHA-216ENST00000514027 DPYSL4O14531 572 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 PFDN1O60925 122 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 PDGFRBP09619 1106 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 LCP1P13796 627 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 CCDC130P13994 396 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 TSHRP16473 764 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 PTDSS1P48651 473 aaKnown RBP12.99□□□□□ -0.33
SDHA-216ENST00000514027 DCAF4L1Q3SXM0 396 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 MARCH8Q5T0T0 291 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 MFSD4BQ5TF39 518 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 RFWD2Q8NHY2 731 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 UTP4Q969X6 686 aaKnown RBP12.99□□□□□ -0.33
SDHA-216ENST00000514027 APOPT1Q96IL0 206 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 GBP5Q96PP8 586 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 SETD4Q9NVD3 440 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 CIDEBQ9UHD4 219 aa12.99□□□□□ -0.33
SDHA-216ENST00000514027 A6NJR5 290 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 STAU1O95793 577 aaKnown RBP12.98□□□□□ -0.33
SDHA-216ENST00000514027 PAX3P23760 479 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 CYP2F1P24903 491 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 HDAC4P56524 1084 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 MUM1Q2TAK8 710 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 MTDHQ86UE4 582 aaKnown RBP12.98□□□□□ -0.33
SDHA-216ENST00000514027 LRRC6Q86X45 466 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 NT5DC4Q86YG4 428 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 SMYD1Q8NB12 490 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 OR6J1Q8NGC5 347 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 TRIM56Q9BRZ2 755 aaKnown RBP12.98□□□□□ -0.33
SDHA-216ENST00000514027 TSSK1BQ9BXA7 367 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 MAGEB5Q9BZ81 275 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 TTLL3Q9Y4R7 772 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 MAD1L1Q9Y6D9 718 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 CFAP69A5D8W1 941 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 TRIM49D1C9J1S8 452 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 E2F6O75461 281 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 SPAG6O75602 509 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 BGNP21810 368 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 AKAP5P24588 427 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 CACNA2D1P54289 1103 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 GBE1Q04446 702 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 PKDCCQ504Y2 493 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 SLC9A4Q6AI14 798 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 DPP9Q86TI2 863 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 ARHGAP18Q8N392 663 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 SMC1BQ8NDV3 1235 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 SLC35F5Q8WV83 523 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 SNX27Q96L92 541 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 OSMRQ99650 979 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 ZNF670Q9BS34 389 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 SLC4A5Q9BY07 1137 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
SDHA-216ENST00000514027 NRDE2Q9H7Z3 1164 aa12.98□□□□□ -0.33
SDHA-216ENST00000514027 CXorf49A8MYA2 514 aaPredicted RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 PDHXO00330 501 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 COPEO14579 308 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 GABBR2O75899 941 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 ATP5HO75947 161 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 MMP3P08254 477 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 SMPD1P17405 629 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 CBX3Q13185 183 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 BMPR2Q13873 1038 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 PLEKHG4Q58EX7 1191 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 SLC27A1Q6PCB7 646 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 TMEM110Q86TL2 294 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 ZNF410Q86VK4 478 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms