RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 VN1R2Q8NFZ6 395 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF707Q96C28 371 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 RBM41Q96IZ5 413 aaKnown RBP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 PIGVQ9NUD9 493 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 HCFC1R1Q9NWW0 138 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 OSER1Q9NX31 292 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 CLDND1Q9NY35 253 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 MRPS23Q9Y3D9 190 aaKnown RBP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 PCDHA3Q9Y5H8 950 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 SAR1BQ9Y6B6 198 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 KCNK3O14649 394 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 MDM4O15151 490 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 TADA3O75528 432 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 ZRANB2O95218 330 aaKnown RBP eCLIP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 PAPLNO95428 1278 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 OAS1P00973 400 aaKnown RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 IGLV3-25P01717 112 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 KRT1P04264 644 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 ATP1A1P05023 1023 aaKnown RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 PRLRP16471 622 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 HARS2P49590 506 aaKnown RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 CXCR3P49682 368 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF135P52742 658 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 CYP4F8P98187 520 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 SLC25A11Q02978 314 aaKnown RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 RING1Q06587 406 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 KRT81Q14533 505 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 PDK2Q15119 407 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 ATAT1Q5SQI0 421 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 ERMARDQ5T6L9 678 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 GPR158Q5T848 1215 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 CCDC181Q5TID7 509 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 GAREM2Q75VX8 874 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 CCDC50Q8IVM0 306 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 KATNAL2Q8IYT4 538 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 RCOR2Q8IZ40 523 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 C12orf76Q8N812 135 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 ATP6V0D2Q8N8Y2 350 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 EXD1Q8NHP7 514 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 HSPH1Q92598 858 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 CD101Q93033 1021 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 PLD4Q96BZ4 506 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 PBKQ96KB5 322 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 NAP1L3Q99457 506 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 TLR10Q9BXR5 811 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 LRRC3Q9BY71 257 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 CARD9Q9H257 536 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 TASP1Q9H6P5 420 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 LSM7Q9UK45 103 aaKnown RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 NUDT5Q9UKK9 219 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 SNX12Q9UMY4 172 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 PACSIN2Q9UNF0 486 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 AP4E1Q9UPM8 1137 aa11.28□□□□□ -0.6
PFDN1-204ENST00000512707 MTCL1Q9Y4B5 1905 aaKnown RBP11.28□□□□□ -0.6
PFDN1-204ENST00000512707 LRRD1A4D1F6 860 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 C2orf78A6NCI8 922 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 TNFRSF10AO00220 468 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 CES2O00748 559 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 LINC01565O15544 149 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 MSI1O43347 362 aaKnown RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 URI1O94763 535 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 GLP2RO95838 553 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 TBX18O95935 607 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 TFE3P19532 575 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 FSHRP23945 695 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 ADRA1BP35368 520 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 ARL4AP40617 200 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 MTHFRP42898 656 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 SLC11A2P49281 568 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 PGFP49763 221 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 TAS2R40P59535 323 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 COPS2P61201 443 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 PITX1P78337 314 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 RBM10P98175 930 aaKnown RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 OTUD1Q5VV17 481 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 TXNDC8Q6A555 127 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 BNIPLQ7Z465 357 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 TMEM150AQ86TG1 271 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 MAB21L3Q8N8X9 362 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 SHKBP1Q8TBC3 707 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 PABPC5Q96DU9 382 aaKnown RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 BTN2A3PQ96KV6 586 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 OSBPL9Q96SU4 736 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 DDX50Q9BQ39 737 aaKnown RBP11.27□□□□□ -0.61
PFDN1-204ENST00000512707 DCLK3Q9C098 648 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms