RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 USP49Q70CQ1 688 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 ACOT1Q86TX2 421 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 TMEM176AQ96HP8 235 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 SMOQ99835 787 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 FGFBP2Q9BYJ0 223 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 DCLK3Q9C098 648 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 CSNK1G1Q9HCP0 422 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 PLA2G4CQ9UP65 541 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 SCML2Q9UQR0 700 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 SLCO1B1Q9Y6L6 691 aa13.21□□□□□ -0.29
DDX41-215ENST00000512431 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 MDM4O15151 490 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 TSPAN3O60637 253 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 STC2O76061 302 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 FAM200BP0CF97 657 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 RALAP11233 206 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 P4HA1P13674 534 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 STAT6P42226 847 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 PSEN1P49768 467 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 COG7P83436 770 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 ZBTB16Q05516 673 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 CYP24A1Q07973 514 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 CCDC173Q0VFZ6 552 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 FNDC3BQ53EP0 1204 aaKnown RBP13.2□□□□□ -0.3
DDX41-215ENST00000512431 HES3Q5TGS1 186 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 BROXQ5VW32 411 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 FYB2Q5VWT5 728 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 LAYNQ6UX15 382 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 GATAD2AQ86YP4 633 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 ZMIZ2Q8NF64 920 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 PIWIL1Q96J94 861 aaKnown RBP13.2□□□□□ -0.3
DDX41-215ENST00000512431 CDK5RAP1Q96SZ6 601 aaKnown RBP13.2□□□□□ -0.3
DDX41-215ENST00000512431 ELF4Q99607 663 aaPredicted RBP13.2□□□□□ -0.3
DDX41-215ENST00000512431 ARID3AQ99856 593 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 SLC2A11Q9BYW1 496 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 CLMPQ9H6B4 373 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 SGK2Q9HBY8 427 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 NAGPAQ9UK23 515 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 NCKAP1Q9Y2A7 1128 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 PCDHA5Q9Y5H7 936 aa13.2□□□□□ -0.3
DDX41-215ENST00000512431 A0A1W2PQH9 124 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 VILLO15195 856 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 CYP26A1O43174 497 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 BEST1O76090 585 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 CCDC130P13994 396 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 CLDN6P56747 220 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 RACK1P63244 317 aaKnown RBP13.19□□□□□ -0.3
DDX41-215ENST00000512431 RHDQ02161 417 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 BIRC3Q13489 604 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 CAMK2GQ13555 558 aaPredicted RBP13.19□□□□□ -0.3
DDX41-215ENST00000512431 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
DDX41-215ENST00000512431 SCARA5Q6ZMJ2 495 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 DDI1Q8WTU0 396 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 WBP1Q96G27 269 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 LGMNQ99538 433 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 VRTNQ9H8Y1 702 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 NMUR1Q9HB89 426 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.19□□□□□ -0.32e-8■■□□□ 12.8
DDX41-215ENST00000512431 OSER1Q9NX31 292 aa13.19□□□□□ -0.3
DDX41-215ENST00000512431 YKT6O15498 198 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 BRINP1O60477 761 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 KLKB1P03952 638 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
DDX41-215ENST00000512431 CYP2J2P51589 502 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 KCNC4Q03721 635 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 TLE3Q04726 772 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 DNAJC3Q13217 504 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 ILKQ13418 452 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 BMT2Q1RMZ1 405 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 KCNT1Q5JUK3 1230 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 EID2Q8N6I1 236 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 GANCQ8TET4 914 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 GOLGA1Q92805 767 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 JAKMIP2Q96AA8 810 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 RASAL2Q9UJF2 1139 aa13.18□□□□□ -0.3
DDX41-215ENST00000512431 GOLGA4Q13439 2230 aaKnown RBP13.18□□□□□ -0.3
DDX41-215ENST00000512431 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 CYSRT1A8MQ03 144 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 CBX4O00257 560 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 CLIC2O15247 247 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX41-215ENST00000512431 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 STX6O43752 255 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 HMBSP08397 361 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 GLDCP23378 1020 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 ADORA2BP29275 332 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms