RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PID1Q7Z2X4 250 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 KRT84Q9NSB2 600 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 SALL4Q9UJQ4 1053 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 CCNE2O96020 404 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 GPD1P21695 349 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 PTGER2P43116 358 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 HSPA13P48723 471 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 HSD17B4P51659 736 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 JAG1P78504 1218 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 ITGADQ13349 1161 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 WDR49Q8IV35 697 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 CDKL3Q8IVW4 592 aaPredicted RBP11.15□□□□□ -0.62
CPNE4-209ENST00000512055 GPC2Q8N158 579 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 COPS5Q92905 334 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 TADA1Q96BN2 335 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 ATXN7L3BQ96GX2 97 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 MRPL1Q9BYD6 325 aaKnown RBP11.15□□□□□ -0.62
CPNE4-209ENST00000512055 TTYH3Q9C0H2 523 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 MROH8Q9H579 483 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 MED26O95402 600 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 RARAP10276 462 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 TGFB3P10600 412 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 SULT1E1P49888 294 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 HUNKP57058 714 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 GCNT1Q02742 428 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 FAXCQ5TGI0 409 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 KIAA1841Q6NSI8 718 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 C3orf62Q6ZUJ4 267 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 TTC30BQ8N4P2 665 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 FAM172AQ8WUF8 416 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 RNFT2Q96EX2 444 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 SERHLQ9NQF3 203 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 CCDC182A6NF36 153 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 THOC7Q6I9Y2 204 aaKnown RBP11.15□□□□□ -0.62
CPNE4-209ENST00000512055 LRRC15Q8TF66 581 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 ROGDIQ9GZN7 287 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 GPRC5DQ9NZD1 345 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 RBMX2Q9Y388 322 aaKnown RBP11.15□□□□□ -0.62
CPNE4-209ENST00000512055 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 CCT8L1PA6NM43 557 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 IL6P05231 212 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 GLRA2P23416 452 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 PIK3R1P27986 724 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 CAPZA2P47755 286 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 MARCKSL1P49006 195 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SRP54P61011 504 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 CACNB2Q08289 660 aaPredicted RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SYTL1Q8IYJ3 562 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 THEM5Q8N1Q8 247 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 PPP1R13LQ8WUF5 828 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 TMEM121Q9BTD3 319 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 TMBIM4Q9HC24 238 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 POLIQ9UNA4 740 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 GTF2A1LQ9UNN4 478 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 KLHL41O60662 606 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SCGNO76038 276 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 FOSL1P15407 271 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 MARSP56192 900 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 TUBA3EQ6PEY2 450 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 ANKRD49Q8WVL7 239 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 ZC3H7BQ9UGR2 993 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SLC12A6Q9UHW9 1150 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 NUP188Q5SRE5 1749 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 A0A0G2JPF8 293 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 HNRNPCL3B7ZW38 293 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 H3BRB1 525 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 AXIN1O15169 862 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 HSMCR30P0CW71 290 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 HNRNPCL4P0DMR1 293 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 DCAF6Q58WW2 860 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 TMEM63BQ5T3F8 832 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SULT1C3Q6IMI6 304 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SLC25A24Q6NUK1 477 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 KDM7AQ6ZMT4 941 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 PORCNQ9H237 461 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 TUT1Q9H6E5 874 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 RNF19AQ9NV58 838 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 GPATCH2LQ9NWQ4 482 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 LOC100653049A0A140TA62 436 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 PRR23AA6NEV1 266 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 KRT34O76011 436 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 RPL21P46778 160 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SLC16A1P53985 500 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 EIF2B5Q13144 721 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 STILQ15468 1287 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 TRADDQ15628 312 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 CDC42EP4Q9H3Q1 356 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 GDF3Q9NR23 364 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 MAFFQ9ULX9 164 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 PAMP19021 973 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF484Q5JVG2 852 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 GNASQ5JWF2 1037 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF618Q5T7W0 954 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 RNF135Q8IUD6 432 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms