RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TRPC3Q13507 836 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 COG2Q14746 738 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRKD1Q15139 912 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 STK38Q15208 465 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC1A5Q15758 541 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CDKN3Q16667 212 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANKDD1AQ495B1 522 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TJAP1Q5JTD0 557 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HDGFL1Q5TGJ6 251 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 LILRA6Q6PI73 481 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF804AQ7Z570 1209 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SHISA5Q8N114 240 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 VPS52Q8N1B4 723 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ATP11CQ8NB49 1132 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TPCN2Q8NHX9 752 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPS4Y2Q8TD47 263 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RAPGEF5Q92565 580 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 JAKMIP1Q96N16 626 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 OSBPL9Q96SU4 736 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM83CQ9BQN1 747 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 UBAC1Q9BSL1 405 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHCHD3Q9NX63 227 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GALNT8Q9NY28 637 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 AKAP7Q9P0M2 348 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYO1AQ9UBC5 1043 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 COPG2Q9UBF2 871 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FETUBQ9UGM5 382 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RASAL2Q9UJF2 1139 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 L3MBTL1Q9Y468 752 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC160A6NGH7 325 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 HHLA1C9JL84 531 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 G3V2L1 256 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 K7ERI5 159 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 UBFD1O14562 309 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NCK2O43639 380 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GCATO75600 419 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRDM1O75626 825 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 STARD3NLO95772 234 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MTHFD2P13995 350 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NPR3P17342 541 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTPN1P18031 435 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 UBA1P22314 1058 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRKCHP24723 683 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 S100GP29377 79 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTNNA1P35221 906 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NAMPTP43490 491 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CAPZA2P47755 286 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC12A2P55011 1212 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 E2F1Q01094 437 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SFSWAPQ12872 951 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC12A1Q13621 1099 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPP2R5AQ15172 486 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 E2F5Q15329 346 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 STILQ15468 1287 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTF1Q16619 201 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF805Q5CZA5 627 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCNT1Q5JUK3 1230 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FNBP1LQ5T0N5 605 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC122Q5T0U0 273 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 STXBP5Q5T5C0 1151 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYDE2Q5VT97 1194 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 BLOC1S2Q6QNY1 142 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCSK4Q6UW60 755 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NLRP9Q7RTR0 991 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NANOGNBQ7Z5D8 188 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 COMTD1Q86VU5 262 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 HOMEZQ8IX15 550 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NDUFAF2Q8N183 169 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 C3orf20Q8ND61 904 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRSS33Q8NF86 280 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CAPSLQ8WWF8 208 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DHX38Q92620 1227 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF524Q96C55 264 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SDCCAG3Q96C92 435 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPR101Q96P66 508 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CUEDC2Q9H467 287 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 THAP9Q9H5L6 903 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC24A3Q9HC58 644 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 XAB2Q9HCS7 855 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RIC8AQ9NPQ8 531 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM184CQ9NVA4 438 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NLRP2Q9NX02 1062 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 STMN3Q9NZ72 180 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TFCP2L1Q9NZI6 479 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RGL1Q9NZL6 768 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNF181Q9P0P0 153 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTTNBP2NLQ9P2B4 639 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ABCD2Q9UBJ2 740 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCNJ14Q9UNX9 436 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SNX9Q9Y5X1 595 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 INTS1Q8N201 2190 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NDUFA2O43678 99 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 LMNAP02545 664 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RB1P06400 928 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT3P12035 628 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DRD5P21918 477 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GRK5P34947 590 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SCTRP47872 440 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 VAV2P52735 878 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms