RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 BADQ92934 168 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 PIWIL1Q96J94 861 aaKnown RBP9.48□□□□□ -0.89
NR1I3-230ENST00000511944 SAMD11Q96NU1 681 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 CDK5RAP1Q96SZ6 601 aaKnown RBP9.48□□□□□ -0.89
NR1I3-230ENST00000511944 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 ZNF670Q9BS34 389 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 TTLL2Q9BWV7 592 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 OSBPL8Q9BZF1 889 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 ULBP1Q9BZM6 244 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 LRRC19Q9H756 370 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 TIMMDC1Q9NPL8 285 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 ABCC13Q9NSE7 274 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 OLA1Q9NTK5 396 aaKnown RBP9.48□□□□□ -0.89
NR1I3-230ENST00000511944 RBM12Q9NTZ6 932 aaKnown RBP9.48□□□□□ -0.89
NR1I3-230ENST00000511944 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 CLIC5Q9NZA1 410 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 PCYOX1Q9UHG3 505 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 IRAK3Q9Y616 596 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 MRPL42Q9Y6G3 142 aaKnown RBP9.48□□□□□ -0.89
NR1I3-230ENST00000511944 SLC4A7Q9Y6M7 1214 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 NLRC5Q86WI3 1866 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 PTPRDP23468 1912 aa9.48□□□□□ -0.89
NR1I3-230ENST00000511944 KIAA0100Q14667 2235 aaKnown RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 hCG_1818297A0A087WSY0 165 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 NDC80O14777 642 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 ERLIN1O75477 346 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 ABLIM3O94929 683 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 GJB6O95452 261 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 TRUB2O95900 331 aaKnown RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 KRT1P04264 644 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 GRIK1P39086 918 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 CDKN2BP42772 138 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 PPP3CCP48454 512 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 NDUFV1P49821 464 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 CACNA2D1P54289 1103 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 HDAC4P56524 1084 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 RAB33AQ14088 237 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 TFDP2Q14188 446 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 SMC1AQ14683 1233 aaKnown RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 DPYSL2Q16555 572 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 CCNG2Q16589 344 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 SPOUT1Q5T280 376 aaKnown RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 MSANTD2Q6P1R3 559 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 BBS12Q6ZW61 710 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 CYP4V2Q6ZWL3 525 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 OTOP2Q7RTS6 562 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 TMEM173Q86WV6 379 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 ZNF461Q8TAF7 563 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 GRK7Q8WTQ7 553 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 SCG3Q8WXD2 468 aaKnown RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 FAM149B1Q96BN6 582 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 FAF2Q96CS3 445 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 MS4A14Q96JA4 679 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 CFAP57Q96MR6 1250 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 KCNK16Q96T55 309 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 LBHD1Q9BQE6 289 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-230ENST00000511944 STIM2Q9P246 746 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
NR1I3-230ENST00000511944 LRRD1A4D1F6 860 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 C3orf70A6NLC5 250 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 YJEFN3A6XGL0 299 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 E7ENQ6 273 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 C5orf67F2Z3F1 127 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CAPN9O14815 690 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 RB1P06400 928 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 THBS1P07996 1170 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 LINC00271P0C7V0 271 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ACRP10323 421 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CTSAP10619 480 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 SLC2A3P11169 496 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ATF2P15336 505 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 H2AFXP16104 143 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ATP2A2P16615 1042 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ZFXP17010 805 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 KDELR1P24390 212 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CYP2F1P24903 491 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 IL1R2P27930 398 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 WEE1P30291 646 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 SSR1P43307 286 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 DNA2P51530 1060 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ARSEP51690 589 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 DRG2P55039 364 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ROR1Q01973 937 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 PLD1Q13393 1074 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 EIF4EBP2Q13542 120 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CUL1Q13616 776 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 SIX1Q15475 284 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms