RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 C5orf42Q9H799 3197 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 CLUHO75153 1309 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 hCG_1818297A0A087WSY0 165 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 H3BNC9 293 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 C4BPAP04003 597 aaKnown RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 KRT4P19013 534 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 TNNI1P19237 187 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 ACO1P21399 889 aaKnown RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 PTDSS1P48651 473 aaKnown RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 PDIA2Q13087 525 aaKnown RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 PAN2Q504Q3 1202 aaKnown RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 TAF1BQ53T94 588 aaPredicted RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 ZFYVE27Q5T4F4 411 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 EEF1DP3Q658K8 133 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 DNAJC24Q6P3W2 148 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 MFN1Q8IWA4 741 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 SLC35B2Q8TB61 432 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 PDZD7Q9H5P4 517 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 MANSC1Q9H8J5 431 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 PRMT7Q9NVM4 692 aaPredicted RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 DNAJC17Q9NVM6 304 aaKnown RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 SORCS3Q9UPU3 1222 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
HMGB2-205ENST00000511316 IPPQ9Y573 584 aa13.33□□□□□ -0.28
HMGB2-205ENST00000511316 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-205ENST00000511316 TBKBP1A7MCY6 615 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 A8MUI8 341 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 INPPL1O15357 1258 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 SPAG7O75391 227 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 T-ENOLP0DO92 83 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 PROZP22891 400 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 DNAJB1P25685 340 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 EFNA5P52803 228 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 ARFIP2P53365 341 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 TAS2R40P59535 323 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 MAPK6Q16659 721 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 NOTUMQ6P988 496 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 DCUN1D2Q6PH85 259 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 C4orf22Q6V702 233 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 VPS52Q8N1B4 723 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.32□□□□□ -0.284e-13■□□□□ 11.3
HMGB2-205ENST00000511316 GDPD5Q8WTR4 605 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 CGRRF1Q99675 332 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 ACO2Q99798 780 aaKnown RBP13.32□□□□□ -0.28
HMGB2-205ENST00000511316 FAM213AQ9BRX8 229 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 C2orf40Q9H1Z8 148 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 PDP2Q9P2J9 529 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 STX18Q9P2W9 335 aaKnown RBP13.32□□□□□ -0.28
HMGB2-205ENST00000511316 DNPEPQ9ULA0 475 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 LRFN2Q9ULH4 789 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 K7ERI5 159 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 SGK1O00141 431 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 GYG2O15488 501 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 MAGEC1O60732 1142 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 MT-ND3P03897 115 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 PRKCBP05771 671 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-205ENST00000511316 MXRA7P84157 204 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 CDK16Q00536 496 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 ZBTB16Q05516 673 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 SLC34A1Q06495 639 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 SF3A3Q12874 501 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGB2-205ENST00000511316 DNAL1Q4LDG9 190 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 SLC27A1Q6PCB7 646 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 SLC30A9Q6PML9 568 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 CPNE8Q86YQ8 564 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 PALM2Q8IXS6 379 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 BANPQ8N9N5 519 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 DEPTORQ8TB45 409 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 NR1H4Q96RI1 486 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-205ENST00000511316 TSC22D3Q99576 134 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 HERPUD2Q9BSE4 406 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 TSSK1BQ9BXA7 367 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 HAPLN2Q9GZV7 340 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 NXF3Q9H4D5 531 aaKnown RBP13.32□□□□□ -0.28
HMGB2-205ENST00000511316 FAM96AQ9H5X1 160 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 TRIM33Q9UPN9 1127 aa13.32□□□□□ -0.28
HMGB2-205ENST00000511316 GRM6O15303 877 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 DDHD2O94830 711 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 RB1P06400 928 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 CD58P19256 250 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 STIP1P31948 543 aaKnown RBP13.31□□□□□ -0.28
HMGB2-205ENST00000511316 RAB27AP51159 221 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 ZNF132P52740 706 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 SARNPP82979 210 aaKnown RBP13.31□□□□□ -0.28
HMGB2-205ENST00000511316 AP1ARQ63HQ0 302 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 ATG16L1Q676U5 607 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 SLC39A4Q6P5W5 647 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 ZNF449Q6P9G9 518 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 TMEM270Q6UE05 265 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 ZNF280BQ86YH2 543 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 ZBTB8OSQ8IWT0 167 aa13.31□□□□□ -0.28
HMGB2-205ENST00000511316 RNF169Q8NCN4 708 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms