RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 UBTFL6P0CB48 400 aaPredicted RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 TGFB3P10600 412 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 FGF3P11487 239 aaPredicted RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 HARSP12081 509 aaKnown RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 PDGFRAP16234 1089 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 IL4RP24394 825 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 RBL1P28749 1068 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 SCNN1AP37088 669 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 SLC1A6P48664 564 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 STAT5BP51692 787 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 POU5F1BQ06416 359 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 NIPAL4Q0D2K0 466 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 INCA1Q0VD86 236 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 CCDC153Q494R4 210 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 ANKRD20A4Q4UJ75 823 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 FAM102AQ5T9C2 384 aaPredicted RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 CES4AQ5XG92 561 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 DCAF15Q66K64 600 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 LCLAT1Q6UWP7 414 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 NPNTQ6UXI9 565 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 ZNF534Q76KX8 674 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 ZDHHC17Q8IUH5 632 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 ADGRF2Q8IZF7 708 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 PQLC3Q8N755 202 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 DRAXINQ8NBI3 349 aaPredicted RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 PRPF31Q8WWY3 499 aaKnown RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 ISL2Q96A47 359 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 QKIQ96PU8 341 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNF8-210ENST00000511214 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 TTC1Q99614 292 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 MECRQ9BV79 373 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 NFKBIZQ9BYH8 718 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 SLC13A1Q9BZW2 595 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 FZD8Q9H461 694 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 Q9H521 79 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 RPF1Q9H9Y2 349 aaKnown RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 GBA2Q9HCG7 927 aaPredicted RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 PCDH18Q9HCL0 1135 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 C6orf203Q9P0P8 240 aaPredicted RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 MORF4L1Q9UBU8 362 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 TJP2Q9UDY2 1190 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 ADAM28Q9UKQ2 775 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 PPM1HQ9ULR3 514 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 TMCO1Q9UM00 188 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 PRPF19Q9UMS4 504 aaKnown RBP9.39□□□□□ -0.91
SNF8-210ENST00000511214 TNFSF13BQ9Y275 285 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 DNAJC16Q9Y2G8 782 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 MAD1L1Q9Y6D9 718 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 PHIPQ8WWQ0 1821 aa9.39□□□□□ -0.91
SNF8-210ENST00000511214 DOCK1Q14185 1865 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 SF3B1O75533 1304 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNF8-210ENST00000511214 ARHGAP42A6NI28 874 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 TMEM114B3SHH9 223 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 M0QYV0 167 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 DENRO43583 198 aaKnown RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 AVILO75366 819 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 AP1G2O75843 785 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 PIAS1O75925 651 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 UPP2O95045 317 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 APRTP07741 180 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 C6orf222P0C671 652 aaPredicted RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 VCLP18206 1134 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 MX2P20592 715 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 CHRNA5P30532 468 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 ADSLP30566 484 aaPredicted RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 RGS2P41220 211 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 GARSP41250 739 aaKnown RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 NUMBP49757 651 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 PRKAA2P54646 552 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 ZNF280AP59817 542 aaPredicted RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 PDE1BQ01064 536 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 SP2Q02086 613 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 SP4Q02446 784 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 LAMTOR4Q0VGL1 99 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 MMRN1Q13201 1228 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 BMPR2Q13873 1038 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 CCNIQ14094 377 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 MAP7Q14244 749 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 TAF5Q15542 800 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 OGFRL1Q5TC84 451 aaPredicted RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 FAXCQ5TGI0 409 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 ATF7IP2Q5U623 682 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 LRRC8BQ6P9F7 803 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 C1orf228Q6PIY5 440 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 ARHGAP22Q7Z5H3 698 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 SETD3Q86TU7 594 aaPredicted RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 NT5DC4Q86YG4 428 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 EGFL6Q8IUX8 553 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 MARVELD2Q8N4S9 558 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 ZNF280CQ8ND82 737 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 FBXO27Q8NI29 283 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 PCDH19Q8TAB3 1148 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 NAT14Q8WUY8 206 aa9.38□□□□□ -0.91
SNF8-210ENST00000511214 SREK1Q8WXA9 508 aaKnown RBP9.38□□□□□ -0.91
SNF8-210ENST00000511214 SEPT1Q8WYJ6 367 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms