RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 ZNF806P0C7X5 589 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 SLC9A1P19634 815 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 NTSR1P30989 418 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 CHKAP35790 457 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 P2RY2P41231 377 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 WASP42768 502 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 GPD2P43304 727 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 APBA1Q02410 837 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 MAP7D1Q3KQU3 841 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 MLKLQ8NB16 471 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 RLN3Q8WXF3 142 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 IRGQQ8WZA9 623 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 SMOC1Q9H4F8 434 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 ACP6Q9NPH0 428 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 RXFP3Q9NSD7 469 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 ABCC13Q9NSE7 274 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 AJAP1Q9UKB5 411 aaPredicted RBP12.59□□□□□ -0.39
CHFR-208ENST00000511001 CDV3Q9UKY7 258 aaKnown RBP12.59□□□□□ -0.39
CHFR-208ENST00000511001 SLC27A6Q9Y2P4 619 aa12.59□□□□□ -0.39
CHFR-208ENST00000511001 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
CHFR-208ENST00000511001 CNOT1A5YKK6 2376 aaKnown RBP12.59□□□□□ -0.39
CHFR-208ENST00000511001 ADAMTS9Q9P2N4 1935 aa12.58□□□□□ -0.39
CHFR-208ENST00000511001 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.58□□□□□ -0.4
CHFR-208ENST00000511001 TCRBV21S2A2A0A5A6 115 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 SLC30A4O14863 429 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 MSI1O43347 362 aaKnown RBP12.58□□□□□ -0.4
CHFR-208ENST00000511001 RHOBTB1O94844 696 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 IGLV3-27P01718 113 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 LTFP02788 710 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 FYNP06241 537 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 KRT5P13647 590 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 HOXB2P14652 356 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 GABRG2P18507 467 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 MPLP40238 635 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 MFAP3P55082 362 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 KIAA1211LQ6NV74 962 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 DPY19L2P1Q6NXN4 242 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 DENND1BQ6P3S1 775 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 TRMT11Q7Z4G4 463 aaKnown RBP12.58□□□□□ -0.4
CHFR-208ENST00000511001 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 NETO1Q8TDF5 533 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 RNF139Q8WU17 664 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 ZNF606Q8WXB4 792 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 PIWIL1Q96J94 861 aaKnown RBP12.58□□□□□ -0.4
CHFR-208ENST00000511001 GABRG3Q99928 467 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 RTKNQ9BST9 563 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 SIX2Q9NPC8 291 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 LMBRD1Q9NUN5 540 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 CYTH4Q9UIA0 394 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 MBD1Q9UIS9 605 aaPredicted RBP12.58□□□□□ -0.4
CHFR-208ENST00000511001 STOML2Q9UJZ1 356 aa12.58□□□□□ -0.4
CHFR-208ENST00000511001 BCLAF3A2AJT9 711 aaKnown RBP12.57□□□□□ -0.4
CHFR-208ENST00000511001 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
CHFR-208ENST00000511001 SDHBP21912 280 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 PON1P27169 355 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 GBP1P32455 592 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 ELF2Q15723 593 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 MEA1Q16626 185 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 GBP6Q6ZN66 633 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 ENOSF1Q7L5Y1 443 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 C11orf74Q86VG3 221 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 CREBRFQ8IUR6 639 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
CHFR-208ENST00000511001 HMGB4Q8WW32 186 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 MIS12Q9H081 205 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 THAP9Q9H5L6 903 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 APEX2Q9UBZ4 518 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 RAD54BQ9Y620 910 aa12.57□□□□□ -0.4
CHFR-208ENST00000511001 ASCC3Q8N3C0 2202 aaKnown RBP12.57□□□□□ -0.4
CHFR-208ENST00000511001 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 USP24Q9UPU5 2620 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 DCDC2BA2VCK2 349 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 WASH3PC4AMC7 463 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
CHFR-208ENST00000511001 TSPAN3O60637 253 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 FBXO21O94952 628 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
CHFR-208ENST00000511001 LATS1O95835 1130 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 NDUFV2P19404 249 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 HOXD9P28356 352 aaPredicted RBP12.56□□□□□ -0.4
CHFR-208ENST00000511001 GNA15P30679 374 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 MTIF2P46199 727 aaKnown RBP12.56□□□□□ -0.4
CHFR-208ENST00000511001 SGSHP51688 502 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 CREB5Q02930 508 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 ENPP2Q13822 863 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 MAN2A1Q16706 1144 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 ARHGAP44Q17R89 818 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 EXOC3L4Q17RC7 722 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 TMEM215Q68D42 235 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 TCEAL6Q6IPX3 200 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 CHPFQ8IZ52 775 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 DDI1Q8WTU0 396 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 SHC3Q92529 594 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms