RNA–Protein interactions for RNA: ENST00000510196.6

GYPB-211, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 508 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-211ENST00000510196 CCDC178Q5BJE1 867 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 SPOUT1Q5T280 376 aaKnown RBP3.36□□□□□ -1.87
GYPB-211ENST00000510196 ZNF618Q5T7W0 954 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 USP17L6PQ6QN14 398 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 BTNL9Q6UXG8 535 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.36□□□□□ -1.87
GYPB-211ENST00000510196 KANSL1Q7Z3B3 1105 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 HEATR3Q7Z4Q2 680 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 DGKHQ86XP1 1220 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 TMEM132CQ8N3T6 1108 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 CTCFLQ8NI51 663 aaPredicted RBP3.36□□□□□ -1.87
GYPB-211ENST00000510196 RUFY2Q8WXA3 655 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 DDB2Q92466 427 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 GLG1Q92896 1179 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 CUL5Q93034 780 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 ZBTB10Q96DT7 871 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 PGBD1Q96JS3 809 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 TCEANC2Q96MN5 208 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 TTC14Q96N46 770 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 YME1L1Q96TA2 773 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 C17orf80Q9BSJ5 609 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 SOX7Q9BT81 388 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 DHRS4Q9BTZ2 278 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 IL25Q9H293 177 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 PXMP2Q9NR77 195 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 TCP11L1Q9NUJ3 509 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 SETD4Q9NVD3 440 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 INTS7Q9NVH2 962 aaKnown RBP3.36□□□□□ -1.87
GYPB-211ENST00000510196 SEC63Q9UGP8 760 aaKnown RBP3.36□□□□□ -1.87
GYPB-211ENST00000510196 TCEAL9Q9UHQ7 104 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 CDH23Q9H251 3354 aa3.36□□□□□ -1.87
GYPB-211ENST00000510196 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 TTC28Q96AY4 2481 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 PARP14Q460N5 1801 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 TCF20Q9UGU0 1960 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 E7EWF7 191 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 ZBTB5O15062 677 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 PRC1O43663 620 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 NBNO60934 754 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 PLEKHA8P1O95397 391 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 SMIM10L2AP0DMW4 78 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 SMIM10L2BP0DMW5 78 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 GHRP10912 638 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 GSPT1P15170 499 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 WT1P19544 449 aaPredicted RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 GPD1P21695 349 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 UBA1P22314 1058 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 SP100P23497 879 aaPredicted RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 CTNNB1P35222 781 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 PROK1P58294 105 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 SERINC3Q13530 473 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 PGM5Q15124 567 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 EPHA7Q15375 998 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 AAK1Q2M2I8 961 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 TCTN1Q2MV58 587 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 HSDL1Q3SXM5 330 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 CELF3Q5SZQ8 465 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 TTC22Q5TAA0 569 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 NFRKBQ6P4R8 1299 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 SYNE3Q6ZMZ3 975 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 RBM23Q86U06 439 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 MICU3Q86XE3 530 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 SMC5Q8IY18 1101 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 RNF169Q8NCN4 708 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 PIK3C3Q8NEB9 887 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 DBF4BQ8NFT6 615 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 ZFP28Q8NHY6 868 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 NCOA7Q8NI08 942 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 AFAP1L1Q8TED9 768 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 TFAP2CQ92754 450 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 KAT2BQ92831 832 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 RPL36ALQ969Q0 106 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 RRP36Q96EU6 259 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 BOD1Q96IK1 185 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 ZNF668Q96K58 619 aaPredicted RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 IWS1Q96ST2 819 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 AIFM2Q9BRQ8 373 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 KATNAL1Q9BW62 490 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 IFIH1Q9BYX4 1025 aaKnown RBP3.35□□□□□ -1.87
GYPB-211ENST00000510196 MTG2Q9H4K7 406 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 EPHX3Q9H6B9 360 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 TMEM74BQ9NUR3 256 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 MAD2L2Q9UI95 211 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 PNMA2Q9UL42 364 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 Q9Y3F1 56 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 MTCH2Q9Y6C9 303 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 WDR19Q8NEZ3 1342 aa3.35□□□□□ -1.87
GYPB-211ENST00000510196 SCN5AQ14524 2016 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 hCG_2014768A0A024R1R8 64 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.34□□□□□ -1.87
GYPB-211ENST00000510196 PRR23D1E9PI22 279 aaPredicted RBP3.34□□□□□ -1.87
GYPB-211ENST00000510196 TP73O15350 636 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 INSIG1O15503 277 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 OPHN1O60890 802 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 DTNBO60941 627 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 NTN1O95631 604 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 LGALS2P05162 132 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 PFKMP08237 780 aa3.34□□□□□ -1.87
GYPB-211ENST00000510196 CYP21A2P08686 494 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms