RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 RAB6CQ9H0N0 254 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 ARHGEF4Q9NR80 690 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 MARK1Q9P0L2 795 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 STRIP2Q9ULQ0 834 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 GPR179Q6PRD1 2367 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 CHURC1-FNTBB4DL54 471 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 IGLV3-25P01717 112 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 TPM2P07951 284 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 DRD1P21728 446 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 TIE1P35590 1138 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 NBL1P41271 181 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 MAGEA9P43362 315 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 KIR2DL1P43626 348 aaPredicted RBP14.14□□□□□ -0.15
SNF8-206ENST00000509989 CXCL12P48061 93 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 FNTBP49356 437 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 TBX4P57082 545 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 NR1I3Q14994 352 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 FAM133BQ5BKY9 247 aaKnown RBP14.14□□□□□ -0.15
SNF8-206ENST00000509989 TADA2BQ86TJ2 420 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 XYLT1Q86Y38 959 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 FAM217AQ8IXS0 508 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 ALLCQ8N6M5 410 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 SLC30A5Q8TAD4 765 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 WFDC5Q8TCV5 224 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 USP33Q8TEY7 942 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 PLD4Q96BZ4 506 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 SLC39A13Q96H72 371 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 CDK5RAP1Q96SZ6 601 aaKnown RBP14.14□□□□□ -0.15
SNF8-206ENST00000509989 ACOX2Q99424 681 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 ANLNQ9NQW6 1124 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 OLA1Q9NTK5 396 aaKnown RBP14.14□□□□□ -0.15
SNF8-206ENST00000509989 DNAJC17Q9NVM6 304 aaKnown RBP14.14□□□□□ -0.15
SNF8-206ENST00000509989 FBXO4Q9UKT5 387 aa14.14□□□□□ -0.15
SNF8-206ENST00000509989 HBS1LQ9Y450 684 aaKnown RBP14.14□□□□□ -0.15
SNF8-206ENST00000509989 MUC22E2RYF6 1773 aaPredicted RBP14.14□□□□□ -0.15
SNF8-206ENST00000509989 SPAG17Q6Q759 2223 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 SYNJ2BP-COX16A0A087WUM0 186 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 I6L893 689 aaPredicted RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 SGK1O00141 431 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 CACNG3O60359 315 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 TRUB2O95900 331 aaKnown RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 PENKP01210 267 aaPredicted RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 CYP1A1P04798 512 aaPredicted RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 WASP42768 502 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 ATXN1P54253 815 aaKnown RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 YWHAZP63104 245 aaKnown RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 FANCCQ00597 558 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 CDR2Q01850 454 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 SLC6A3Q01959 620 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 GOLGA8FQ08AF8 430 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 GOLGA8DPQ0D2H9 430 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 EIF4EBP2Q13542 120 aaPredicted RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 DCAF6Q58WW2 860 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 ZC3H12AQ5D1E8 599 aaKnown RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 C1orf228Q6PIY5 440 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 TMEM92Q6UXU6 159 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 ABCA7Q8IZY2 2146 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 PRICKLE1Q96MT3 831 aaPredicted RBP14.13□□□□□ -0.15
SNF8-206ENST00000509989 SLC2A13Q96QE2 648 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 HHIPQ96QV1 700 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 SPAG5Q96R06 1193 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 PDCL3Q9H2J4 239 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 POPDC2Q9HBU9 364 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 TMPRSS4Q9NRS4 437 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 COX16Q9P0S2 106 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 FBXO10Q9UK96 956 aa14.13□□□□□ -0.15
SNF8-206ENST00000509989 A0A0A0MRY4 1105 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 GOLGA8SH3BPF8 625 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 IRAK2O43187 625 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 ADAM23O75077 832 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 KLF8O95600 359 aaPredicted RBP14.12□□□□□ -0.15
SNF8-206ENST00000509989 MOCS2O96007 188 aaPredicted RBP14.12□□□□□ -0.15
SNF8-206ENST00000509989 APODP05090 189 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 GGCXP38435 758 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 PBX1P40424 430 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 STAT1P42224 750 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 NUMBP49757 651 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 MRE11P49959 708 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 CCR3P51677 355 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 BPIFB4P59827 614 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 RNASE9P60153 205 aaKnown RBP14.12□□□□□ -0.15
SNF8-206ENST00000509989 AMPD2Q01433 879 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 PTP4A2Q12974 167 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 GEN1Q17RS7 908 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 EGFLAMQ63HQ2 1017 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 TMEM215Q68D42 235 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 MAMSTRQ6ZN01 415 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 MMS22LQ6ZRQ5 1243 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 IRF2BP2Q7Z5L9 587 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 SYNPOQ8N3V7 929 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 TERB1Q8NA31 727 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 IL17RCQ8NAC3 791 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 TXNDC5Q8NBS9 432 aaKnown RBP14.12□□□□□ -0.15
SNF8-206ENST00000509989 ZBTB44Q8NCP5 570 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 TMEM35BQ8NCS4 154 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 DCLK3Q9C098 648 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 TTYH3Q9C0H2 523 aa14.12□□□□□ -0.15
SNF8-206ENST00000509989 NUCKS1Q9H1E3 243 aaKnown RBP14.12□□□□□ -0.15
SNF8-206ENST00000509989 DEC1Q9P2X7 70 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms