RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 XPO7Q9UIA9 1087 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 SNX12Q9UMY4 172 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ANGEL1Q9UNK9 670 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 AGAP1Q9UPQ3 857 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ICKQ9UPZ9 632 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 SLC9A8Q9Y2E8 581 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 POFUT2Q9Y2G5 429 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 AP1M2Q9Y6Q5 423 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 UMODL1Q5DID0 1318 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PVALEFA0A1B0GWK0 134 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 HEATR9A2RTY3 570 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ARHGEF35A5YM69 484 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 M0QZ92 97 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 KIAA0391O15091 583 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 CLOCKO15516 846 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PRPF3O43395 683 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 SSNA1O43805 119 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 LDLRP01130 860 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 HMBSP08397 361 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CYP3A4P08684 503 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 SNRPAP09012 282 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 HOXB7P09629 217 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ALADP13716 330 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 MYL12AP19105 171 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CD53P19397 219 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 DCKP27707 260 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 HTR2AP28223 471 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PLA2G4AP47712 749 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 HNRNPFP52597 415 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 TNK2Q07912 1038 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PMPCAQ10713 525 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PTGES3Q15185 160 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 ZNF284Q2VY69 593 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PLA2G4EQ3MJ16 856 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 VPS26BQ4G0F5 336 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 INO80DQ53TQ3 878 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 FAM47CQ5HY64 1035 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ANKRD40Q6AI12 368 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 RASGRP2Q7LDG7 609 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 METTL3Q86U44 580 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 HDDC3Q8N4P3 179 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 RAB42Q8N4Z0 105 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 SEMA6DQ8NFY4 1073 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ZNF420Q8TAQ5 688 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 ACTRT2Q8TDY3 377 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CCDC107Q8WV48 283 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ELMO2Q96JJ3 720 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 HHIPL1Q96JK4 782 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 SLC4A9Q96Q91 983 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 MTMR12Q9C0I1 747 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 MED28Q9H204 178 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 NCOA5Q9HCD5 579 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 NLRC4Q9NPP4 1024 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TRPV5Q9NQA5 729 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 KLHL11Q9NVR0 708 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TLR7Q9NYK1 1049 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 LRWD1Q9UFC0 647 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 AURKCQ9UQB9 309 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 NR2E3Q9Y5X4 410 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ABCB11O95342 1321 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 A0A1B0GVC2 190 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 C5orf51A6NDU8 294 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 EEF2KO00418 725 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 KMOO15229 486 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MITFO75030 526 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 FADS2O95864 444 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 MOCS2O96007 188 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 IFNA10P01566 189 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 IFNA4P05014 189 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 UQCRC1P31930 480 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PRAMEP78395 509 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 CDK17Q00537 523 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MVKQ03426 396 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RBL2Q08999 1139 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 SLC29A2Q14542 456 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PTPRNQ16849 979 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 KCTD19Q17RG1 926 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 ZNF423Q2M1K9 1284 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PLEKHG4Q58EX7 1191 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 INTS6LQ5JSJ4 861 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 LRRC66Q68CR7 880 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 GPR153Q6NV75 609 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 CNSTQ6PJW8 725 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 DHX40Q8IX18 779 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 SDR16C5Q8N3Y7 309 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 SRBD1Q8N5C6 995 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 FANCBQ8NB91 859 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 AGR3Q8TD06 166 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 GDPD5Q8WTR4 605 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 THRSPQ92748 146 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RNF34Q969K3 372 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 C8orf48Q96LL4 319 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 GPATCH1Q9BRR8 931 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 SLC22A4Q9H015 551 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ATXN3LQ9H3M9 355 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MRPL22Q9NWU5 206 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 C3orf18Q9UK00 162 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 TBC1D24Q9ULP9 559 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PTPN22Q9Y2R2 807 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 HCN4Q9Y3Q4 1203 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms