RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 NCAM1P13591 858 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 HNRNPH3P31942 346 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 OPRD1P41143 372 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 MATKP42679 507 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 PTPN5P54829 565 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 CDK17Q00537 523 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 FMO1Q01740 532 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 CENPCQ03188 943 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 ARID5BQ14865 1188 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 UBXN2BQ14CS0 331 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 PTPN20Q4JDL3 420 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 LY6G5CQ5SRR4 150 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 TRIM68Q6AZZ1 485 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 TXNDC11Q6PKC3 985 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 MIB1Q86YT6 1006 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 NDRG1Q92597 394 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 NELL1Q92832 810 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 CD101Q93033 1021 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 PNKPQ96T60 521 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 DDX50Q9BQ39 737 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 FOXQ1Q9C009 403 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 SEMA4AQ9H3S1 761 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 LMAN1LQ9HAT1 526 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 AGO1Q9UL18 857 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 SLC27A6Q9Y2P4 619 aa11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 MTF2Q9Y483 593 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.05□□□□□ -0.64
POLR2J3-213ENST00000508848 CCDC163A0A0D9SF12 145 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 SLC12A8A0AV02 714 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 CAPN9O14815 690 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 NPC1O15118 1278 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 TIMM44O43615 452 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 ENDOD1O94919 500 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 PENKP01210 267 aaPredicted RBP11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 COL9A1P20849 921 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 CD72P21854 359 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 CORO1AP31146 461 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 GBP1P32455 592 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 GRIA2P42262 883 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 SLC11A2P49281 568 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 MRPS21P82921 87 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 ZBED6P86452 979 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 TRIM14Q14142 442 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 SARM1Q6SZW1 724 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 BNIPLQ7Z465 357 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 XYLT1Q86Y38 959 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 TMEM25Q86YD3 366 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 DQX1Q8TE96 717 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 CLEC4CQ8WTT0 213 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 EDEM1Q92611 657 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 WBP2Q969T9 261 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 BTN2A3PQ96KV6 586 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 XPO6Q96QU8 1125 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 NPY6RQ99463 290 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 AGPAT1Q99943 283 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 RETREG1Q9H6L5 497 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 DEC1Q9P2X7 70 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 SLC12A6Q9UHW9 1150 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 RASAL2Q9UJF2 1139 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 TMEM59LQ9UK28 342 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 NUDT5Q9UKK9 219 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 NAALADL1Q9UQQ1 740 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
POLR2J3-213ENST00000508848 KCNU1A8MYU2 1149 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 TRUB2O95900 331 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 ERBB2P04626 1255 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 CYBBP04839 570 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 CALB1P05937 261 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 DCNP07585 359 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 SOX9P48436 509 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 CCR3P51677 355 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 NRLP54845 237 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 TBX4P57082 545 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 PTP4A2Q12974 167 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 PON2Q15165 354 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 CLEC16AQ2KHT3 1053 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 SLC25A52Q3SY17 297 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 MPPE1Q53F39 396 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 SFMBT2Q5VUG0 894 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 SYPL2Q5VXT5 272 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 ACAD10Q6JQN1 1059 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 FSTL4Q6MZW2 842 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 PHTF2Q8N3S3 785 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 FCRL2Q96LA5 508 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 C1orf74Q96LT6 269 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 SYNCQ9H7C4 482 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 FBRSL1Q9HCM7 1045 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 PRMT8Q9NR22 394 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 SFMBT1Q9UHJ3 866 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 DOCK4Q8N1I0 1966 aa11.03□□□□□ -0.64
POLR2J3-213ENST00000508848 COL4A3Q01955 1670 aa11.02□□□□□ -0.64
POLR2J3-213ENST00000508848 FRYLO94915 3013 aa11.02□□□□□ -0.65
POLR2J3-213ENST00000508848 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.65
POLR2J3-213ENST00000508848 PROB1E7EW31 1015 aa11.02□□□□□ -0.65
POLR2J3-213ENST00000508848 K7EQS6 105 aa11.02□□□□□ -0.65
POLR2J3-213ENST00000508848 MDM4O15151 490 aa11.02□□□□□ -0.65
POLR2J3-213ENST00000508848 ACSL4O60488 711 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms