RNA–Protein interactions for RNA: ENST00000508735.5

SNHG4-206, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 310 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-206ENST00000508735 OR2I1PQ8NGU4 316 aa12.79□□□□□ -0.36
SNHG4-206ENST00000508735 CEP76Q8TAP6 659 aa12.79□□□□□ -0.36
SNHG4-206ENST00000508735 ERCC4Q92889 916 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-206ENST00000508735 GTPBP2Q9BX10 602 aaKnown RBP12.79□□□□□ -0.36
SNHG4-206ENST00000508735 ULBP1Q9BZM6 244 aa12.79□□□□□ -0.36
SNHG4-206ENST00000508735 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-206ENST00000508735 THAP10Q9P2Z0 257 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-206ENST00000508735 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
SNHG4-206ENST00000508735 TRIM49BA6NDI0 452 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 C1QTNF9BB2RNN3 333 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 XPO1O14980 1071 aaKnown RBP12.78□□□□□ -0.36
SNHG4-206ENST00000508735 SLC16A3O15427 465 aaKnown RBP12.78□□□□□ -0.36
SNHG4-206ENST00000508735 C1QTNF9P0C862 333 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 ATXN3P54252 364 aaPredicted RBP12.78□□□□□ -0.36
SNHG4-206ENST00000508735 BCAT1P54687 386 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 SLC8A3P57103 927 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 FKBP3Q00688 224 aaKnown RBP12.78□□□□□ -0.36
SNHG4-206ENST00000508735 ENPP2Q13822 863 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 FAM217AQ8IXS0 508 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 CPXM2Q8N436 756 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 UBR7Q8N806 425 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 RBBP8NLQ8NC74 664 aaPredicted RBP12.78□□□□□ -0.36
SNHG4-206ENST00000508735 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 ZNF419Q96HQ0 510 aaPredicted RBP12.78□□□□□ -0.36
SNHG4-206ENST00000508735 TSG101Q99816 390 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 MKRN2Q9H000 416 aaKnown RBP12.78□□□□□ -0.36
SNHG4-206ENST00000508735 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 RMND1Q9NWS8 449 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 STRIP2Q9ULQ0 834 aa12.78□□□□□ -0.36
SNHG4-206ENST00000508735 PI4KAP42356 2102 aa12.77□□□□□ -0.36
SNHG4-206ENST00000508735 ASCC3Q8N3C0 2202 aaKnown RBP12.77□□□□□ -0.36
SNHG4-206ENST00000508735 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 ARHGAP33O14559 1287 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 NDUFS2O75306 463 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 CYBBP04839 570 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 PROS1P07225 676 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 CD19P15391 556 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 PRKCHP24723 683 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 MAOBP27338 520 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 CD6P30203 668 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 ADIGQ0VDE8 80 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.37
SNHG4-206ENST00000508735 LRMPQ12912 555 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 ZNF234Q14588 700 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 STARD3Q14849 445 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.37
SNHG4-206ENST00000508735 TMEM215Q68D42 235 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 UNQ6494/PRO21346Q6UXR6 183 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 RABEPKQ7Z6M1 372 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 METTL3Q86U44 580 aaKnown RBP12.77□□□□□ -0.37
SNHG4-206ENST00000508735 RGL4Q8IZJ4 473 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 HDDC3Q8N4P3 179 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 MINDY1Q8N5J2 469 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 SPATA20Q8TB22 786 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 DDI1Q8WTU0 396 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 EDEM1Q92611 657 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 SLC35C1Q96A29 364 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 PLD4Q96BZ4 506 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 CCDC34Q96HJ3 373 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 GSDMAQ96QA5 445 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
SNHG4-206ENST00000508735 SLC32A1Q9H598 525 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 WSB2Q9NYS7 404 aaPredicted RBP12.77□□□□□ -0.37
SNHG4-206ENST00000508735 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
SNHG4-206ENST00000508735 SFMBT1Q9UHJ3 866 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
SNHG4-206ENST00000508735 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 SPAARA0A1B0GVQ0 90 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 YJEFN3A6XGL0 299 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 E7ENQ6 273 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 NPC1O15118 1278 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 TSPAN3O60637 253 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 OPHN1O60890 802 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 GABBR2O75899 941 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 HOXD9P28356 352 aaPredicted RBP12.76□□□□□ -0.37
SNHG4-206ENST00000508735 TPMTP51580 245 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 COPAP53621 1224 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 YWHAEP62258 255 aaKnown RBP12.76□□□□□ -0.37
SNHG4-206ENST00000508735 FAM193AP78312 1265 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 MPPE1Q53F39 396 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 BSPRYQ5W0U4 402 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 TMPRSS6Q8IU80 811 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 UCMAQ8WVF2 138 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 TFAP2BQ92481 460 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 TOE1Q96GM8 510 aaKnown RBP12.76□□□□□ -0.37
SNHG4-206ENST00000508735 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
SNHG4-206ENST00000508735 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
SNHG4-206ENST00000508735 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms