RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TAAR1Q96RJ0 339 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 MPHOSPH6Q99547 160 aaKnown RBP3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 MTMR10Q9NXD2 777 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 CEP72Q9P209 647 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 COL20A1Q9P218 1284 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 SLC23A1Q9UHI7 598 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 MAD2L2Q9UI95 211 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 ZNF180Q9UJW8 692 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 G3BP2Q9UN86 482 aaKnown RBP3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 MRPL11Q9Y3B7 192 aaKnown RBP3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 PCDHB1Q9Y5F3 818 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 LAMA4Q16363 1823 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 LCTP09848 1927 aa3.99□□□□□ -1.77
UBE2D3-226ENST00000508635 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 ERICH2A1L162 156 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 KIAA0391O15091 583 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 AKAP10O43572 662 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 CYTH3O43739 400 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 EIF3JO75822 258 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 ARIH2O95376 493 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TXNP10599 105 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 CSF2RAP15509 400 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PDCP20941 246 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 SLC6A2P23975 617 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 CYP2C18P33260 490 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 CPT1AP50416 773 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 RNASE9P60153 205 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 SLC25A3Q00325 362 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PURAQ00577 322 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 CDC42EP1Q00587 391 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 CREMQ03060 361 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PPIGQ13427 754 aaKnown RBP eCLIP3.98□□□□□ -1.773e-7■□□□□ 10.1
UBE2D3-226ENST00000508635 FOXE3Q13461 319 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PIN1Q13526 163 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TOB2Q14106 344 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 WTAPQ15007 396 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PPP2R5BQ15173 497 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 STXBP2Q15833 593 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 RABL3Q5HYI8 236 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TMEM240Q5SV17 173 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 USP51Q70EK9 711 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 MED25Q71SY5 747 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 DRC7Q8IY82 874 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 FBXL16Q8N461 479 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TMEM199Q8N511 208 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 SAMD3Q8N6K7 520 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 OR6J1Q8NGC5 347 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 CASKIN2Q8WXE0 1202 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 JPH3Q8WXH2 748 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 LRGUKQ96M69 825 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 GUCD1Q96NT3 240 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PIGSQ96S52 555 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 IWS1Q96ST2 819 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 RMDN3Q96TC7 470 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 VRK1Q99986 396 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 MTG1Q9BT17 334 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 NDC1Q9BTX1 674 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TEX101Q9BY14 249 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TRPV6Q9H1D0 765 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 VPS11Q9H270 941 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 ALDH8A1Q9H2A2 487 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 ZNF768Q9H5H4 540 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 RIOX1Q9H6W3 641 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TRMT13Q9NUP7 481 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 FBXO34Q9NWN3 711 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PARPBPQ9NWS1 579 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 MAP3K20Q9NYL2 800 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 TRPM5Q9NZQ8 1165 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 ZIM2Q9NZV7 527 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 ANKRD6Q9Y2G4 727 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 STXBP5LQ9Y2K9 1186 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 PCDHA1Q9Y5I3 950 aa3.98□□□□□ -1.77
UBE2D3-226ENST00000508635 UMODL1Q5DID0 1318 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 LRRC14BA6NHZ5 514 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 DRGXA6NNA5 263 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 GRXCR1A8MXD5 290 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 GCOM1H8Y6P7 765 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SH2B2O14492 632 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ZNF185O15231 689 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 PJA2O43164 708 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 PRC1O43663 620 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ABLIM3O94929 683 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 POMCP01189 267 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 GH1P01241 217 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 FGBP02675 491 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SLPIP03973 132 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ITGB1P05556 798 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 MMP3P08254 477 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 MYL3P08590 195 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SBK3P0C264 359 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SUPT20HL2P0C7V6 817 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 POLR2MP0CAP2 368 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SMARCA1P28370 1054 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 HOXA13P31271 388 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 MCM5P33992 734 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 HSPA4P34932 840 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 LIFRP42702 1097 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ARHGAP1Q07960 439 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 TRAF1Q13077 416 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms