RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 C11orf70Q9BRQ4 267 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ECT2Q9H8V3 914 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 TBC1D17Q9HA65 648 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 MRPL47Q9HD33 250 aaKnown RBP9.52□□□□□ -0.89
NUP54-207ENST00000508583 SPHK2Q9NRA0 654 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 HEBP1Q9NRV9 189 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ABHD10Q9NUJ1 306 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 PARVAQ9NVD7 372 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.52□□□□□ -0.89
NUP54-207ENST00000508583 DDIT4Q9NX09 232 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 GTSE1Q9NYZ3 720 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 SFMBT1Q9UHJ3 866 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 NAALADL1Q9UQQ1 740 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 SCINQ9Y6U3 715 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 F5P12259 2224 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 COL4A2P08572 1712 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 SSU72P8A0A1W2PR75 194 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 KRBA1A5PL33 1030 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 GOLGA8SH3BPF8 625 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 HOXC11O43248 304 aaPredicted RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 GRAP2O75791 330 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 IGLV3-27P01718 113 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 KRT3P12035 628 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ARSAP15289 507 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 DRD1P21728 446 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 SDC4P31431 198 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 RNASE9P60153 205 aaKnown RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 ZXDBP98169 803 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 TNK2Q07912 1038 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 PPP2R5DQ14738 602 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 UBXN2BQ14CS0 331 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 DHCR24Q15392 516 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ANO4Q32M45 955 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 SLC25A52Q3SY17 297 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 FBXO43Q4G163 708 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 BRMS1LQ5PSV4 323 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ADGRF1Q5T601 910 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 TRIM68Q6AZZ1 485 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ASTLQ6HA08 431 aaPredicted RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 DCUN1D2Q6PH85 259 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 Q6ZNB5 142 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ZNF571Q7Z3V5 609 aaPredicted RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 TAC4Q86UU9 113 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 GAS2L3Q86XJ1 694 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 DENND1CQ8IV53 801 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 CCDC117Q8IWD4 279 aaPredicted RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 BBS7Q8IWZ6 715 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 MCOLN2Q8IZK6 566 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ADGRG2Q8IZP9 1017 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 DEFB106AQ8N104 65 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 SYNPOQ8N3V7 929 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ATP6V0D2Q8N8Y2 350 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 FLCNQ8NFG4 579 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 PGAP3Q96FM1 320 aaPredicted RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 BTN2A3PQ96KV6 586 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 PCDHB18PQ96TA0 734 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 PRRX2Q99811 253 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 NCAPGQ9BPX3 1015 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 SYT11Q9BT88 431 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 DDX23Q9BUQ8 820 aaKnown RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 LTB4R2Q9NPC1 389 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 LUC7LQ9NQ29 371 aaKnown RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 C11orf16Q9NQ32 467 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 HPS4Q9NQG7 708 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 METTL5Q9NRN9 209 aaKnown RBP9.51□□□□□ -0.89
NUP54-207ENST00000508583 MARK1Q9P0L2 795 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 ADAMTS1Q9UHI8 967 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 LCMT1Q9UIC8 334 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 SIT1Q9Y3P8 196 aa9.51□□□□□ -0.89
NUP54-207ENST00000508583 SIGLEC16A6NMB1 481 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 M0QYT0 321 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 MSI1O43347 362 aaKnown RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 AKR1B10O60218 316 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 IPO7O95373 1038 aaKnown RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 IGLV3-25P01717 112 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 FTLP02792 175 aaPredicted RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 CYP17A1P05093 508 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 FYNP06241 537 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 SKILP12757 684 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 PDGFRAP16234 1089 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 AOC1P19801 751 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 CDC25BP30305 580 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 RDXP35241 583 aaKnown RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 SULT1E1P49888 294 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 DEUP1Q05D60 604 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 NME3Q13232 169 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 ARL13BQ3SXY8 428 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 MPPE1Q53F39 396 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 DGKKQ5KSL6 1271 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 LY6G5CQ5SRR4 150 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 TTC39BQ5VTQ0 682 aaPredicted RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 E4F1Q66K89 784 aaPredicted RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 HGSNATQ68CP4 663 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 FAM217AQ8IXS0 508 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 PJA1Q8NG27 643 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 RIN3Q8TB24 985 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 CD101Q93033 1021 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms