RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZNF677Q86XU0 584 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 GPR161Q8N6U8 529 aaKnown RBP20.73■□□□□ 0.91
SFXN1-209ENST00000508290 NAT16Q8N8M0 369 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 TMEM35BQ8NCS4 154 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 MSANTD4Q8NCY6 345 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 PDCL3Q9H2J4 239 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 ACP6Q9NPH0 428 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 SFMBT1Q9UHJ3 866 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 FBXO10Q9UK96 956 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 SMG5Q9UPR3 1016 aaKnown RBP20.73■□□□□ 0.91
SFXN1-209ENST00000508290 TLR6Q9Y2C9 796 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 SLC27A6Q9Y2P4 619 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 PIK3R2O00459 728 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 PAPSS1O43252 624 aaPredicted RBP20.72■□□□□ 0.91
SFXN1-209ENST00000508290 ALDH1A2O94788 518 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 CYP11B1P15538 503 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 TBX4P57082 545 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 NCAPHQ15003 741 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 C10orf76Q5T2E6 689 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 MPP7Q5T2T1 576 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 FYB2Q5VWT5 728 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 C11orf74Q86VG3 221 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 C1orf131Q8NDD1 294 aaKnown RBP20.72■□□□□ 0.91
SFXN1-209ENST00000508290 TSTD1Q8NFU3 115 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 CLEC4CQ8WTT0 213 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 SYNCQ9H7C4 482 aa20.72■□□□□ 0.91
SFXN1-209ENST00000508290 AJAP1Q9UKB5 411 aaPredicted RBP20.72■□□□□ 0.91
SFXN1-209ENST00000508290 HSF2BPO75031 334 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 CDH5P33151 784 aaPredicted RBP20.71■□□□□ 0.91
SFXN1-209ENST00000508290 SEC13P55735 322 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 EIF4HQ15056 248 aaKnown RBP20.71■□□□□ 0.91
SFXN1-209ENST00000508290 CRY1Q16526 586 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 ANO6Q4KMQ2 910 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 LAIR1Q6GTX8 287 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 IL17RCQ8NAC3 791 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 DQX1Q8TE96 717 aaKnown RBP20.71■□□□□ 0.91
SFXN1-209ENST00000508290 GANQ9H2C0 597 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 POLMQ9NP87 494 aaPredicted RBP20.71■□□□□ 0.91
SFXN1-209ENST00000508290 C2orf42Q9NWW7 574 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 CYTH4Q9UIA0 394 aa20.71■□□□□ 0.91
SFXN1-209ENST00000508290 KIAA1549LQ6ZVL6 1849 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 AXIN1O15169 862 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 CAVIN2O95810 425 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 FYNP06241 537 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 SCNN1AP37088 669 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 SIM2Q14190 667 aaPredicted RBP20.7■□□□□ 0.9
SFXN1-209ENST00000508290 HEATR6Q6AI08 1181 aaKnown RBP20.7■□□□□ 0.9
SFXN1-209ENST00000508290 SDE2Q6IQ49 451 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 WDTC1Q8N5D0 677 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 AOPEPQ8N6M6 819 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 ZNF513Q8N8E2 541 aaPredicted RBP20.7■□□□□ 0.9
SFXN1-209ENST00000508290 NEK11Q8NG66 645 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 DDI1Q8WTU0 396 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 GAB3Q8WWW8 586 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 SPAG5Q96R06 1193 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 ERGIC2Q96RQ1 377 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 CPXM1Q96SM3 734 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 FAM207AQ9NSI2 230 aaPredicted RBP20.7■□□□□ 0.9
SFXN1-209ENST00000508290 RRN3Q9NYV6 651 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 NCDNQ9UBB6 729 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 GMEB2Q9UKD1 530 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 SIK3Q9Y2K2 1263 aa20.7■□□□□ 0.9
SFXN1-209ENST00000508290 MYO15AQ9UKN7 3530 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 TYW5A2RUC4 315 aaKnown RBP20.69■□□□□ 0.9
SFXN1-209ENST00000508290 GFRA2O00451 464 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 MSI1O43347 362 aaKnown RBP20.69■□□□□ 0.9
SFXN1-209ENST00000508290 CISD3P0C7P0 127 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 SLC2A3P11169 496 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 TIE1P35590 1138 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 UBXN1Q04323 297 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 RASSF3Q86WH2 238 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 PASD1Q8IV76 773 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 ALLCQ8N6M5 410 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 UCMAQ8WVF2 138 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 PCMTD1Q96MG8 357 aaPredicted RBP20.69■□□□□ 0.9
SFXN1-209ENST00000508290 NAALADL1Q9UQQ1 740 aa20.69■□□□□ 0.9
SFXN1-209ENST00000508290 ZBTB24O43167 697 aaPredicted RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 TIMM44O43615 452 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 ACSL4O60488 711 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 RPP40O75818 363 aaKnown RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 KLF8O95600 359 aaPredicted RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 APOEP02649 317 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 CHRM1P11229 460 aaPredicted RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 NTSR1P30989 418 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 GBP1P32455 592 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 STAT1P42224 750 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 ZNF165P49910 485 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 POLR2FP61218 127 aaKnown RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 CDK17Q00537 523 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 DMWDQ09019 674 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 MESP2Q0VG99 397 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 SYCP1Q15431 976 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 CEP68Q76N32 757 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 SLC26A9Q7LBE3 791 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 ANKS1BQ7Z6G8 1248 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 TXNDC5Q8NBS9 432 aaKnown RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 ZNF397Q8NF99 534 aaPredicted RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 TMA16Q96EY4 203 aaKnown RBP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 SLC39A13Q96H72 371 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 SLC2A13Q96QE2 648 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms