RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 P3H2Q8IVL5 708 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 LINC01465Q8N7H1 131 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 ABHD11Q8NFV4 315 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 OR6Y1Q8NGX8 325 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 HMGB4Q8WW32 186 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 ASB12Q8WXK4 309 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 HERVK_113Q902F9 699 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 C3orf49Q96BT1 292 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 ZSCAN31Q96LW9 406 aaPredicted RBP3.95□□□□□ -1.78
LSM6-205ENST00000507449 BBC3Q96PG8 261 aaPredicted RBP3.95□□□□□ -1.78
LSM6-205ENST00000507449 ARHGAP39Q9C0H5 1083 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 SEPSECSQ9HD40 501 aaKnown RBP3.95□□□□□ -1.78
LSM6-205ENST00000507449 ASIC5Q9NY37 505 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 MGAT4CQ9UBM8 478 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 PGAP2Q9UHJ9 254 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 ADAM21Q9UKJ8 722 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 RCE1Q9Y256 329 aa3.95□□□□□ -1.78
LSM6-205ENST00000507449 CCDC151A5D8V7 595 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 RRN3P2A6NIE6 340 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 E7EVH7 732 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 EYA2O00167 538 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 FOXN1O15353 648 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 TMPRSS11DO60235 418 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 LARGE1O95461 756 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 AGR2O95994 175 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 NPSP0C0P6 89 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 TMIGD3P0DMS9 266 aaPredicted RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 MYCLP12524 364 aaPredicted RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 C6P13671 934 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 ATF7P17544 494 aaPredicted RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 NDUFB7P17568 137 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 SERPINA4P29622 427 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 MCM7P33993 719 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 GALNSP34059 522 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 RARRES1P49788 294 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 CCT8P50990 548 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 FOXL2P58012 376 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 RPL15P61313 204 aaKnown RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 POU5F1BQ06416 359 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 ABHD18Q0P651 414 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 EFR3AQ14156 821 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 ADCK5Q3MIX3 580 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 ALFQ53S48 1182 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 AARS2Q5JTZ9 985 aaKnown RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 ACSM6Q6P461 480 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 SYT13Q7L8C5 426 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 KRT27Q7Z3Y8 459 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 LRRTM4Q86VH4 590 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 C2CD5Q86YS7 1000 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 SFTPA1Q8IWL2 248 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 AFG1LQ8WV93 481 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 TRIM63Q969Q1 353 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 SDCCAG3Q96C92 435 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 TRMT61AQ96FX7 289 aaKnown RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 VPS50Q96JG6 964 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 SNX18Q96RF0 628 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 MMS19Q96T76 1030 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 PYM1Q9BRP8 204 aaKnown RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 BRD8Q9H0E9 1235 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 TOR3AQ9H497 397 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 CDCP1Q9H5V8 836 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 CCDC134Q9H6E4 229 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 IL17RBQ9NRM6 502 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 RAB21Q9UL25 225 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 NFU1Q9UMS0 254 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 UBE2J1Q9Y385 318 aaPredicted RBP3.94□□□□□ -1.78
LSM6-205ENST00000507449 HS3ST3A1Q9Y663 406 aa3.94□□□□□ -1.78
LSM6-205ENST00000507449 EFCAB8A8MWE9 144 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 QSOX1O00391 747 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 NKX2-8O15522 239 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 KRT38O76015 456 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 KAT7O95251 611 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 POLBP06746 335 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 FAM163BP0C2L3 166 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 CNTFP26441 200 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 IGHMBP2P38935 993 aaKnown RBP3.93□□□□□ -1.78
LSM6-205ENST00000507449 CCR5P51681 352 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 ACTR2P61160 394 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 PDCLQ13371 301 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 GAB1Q13480 694 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 DCTN1Q14203 1278 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 LRRC24Q50LG9 513 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 PCID2Q5JVF3 399 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 ANKRD40Q6AI12 368 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 DGAT2L7PQ6IED9 249 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 MTHFD1LQ6UB35 978 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 NAPRTQ6XQN6 538 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 RASGRP2Q7LDG7 609 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 BCDIN3DQ7Z5W3 292 aaKnown RBP3.93□□□□□ -1.78
LSM6-205ENST00000507449 ANKS1BQ7Z6G8 1248 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 RASAL3Q86YV0 1011 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 TMTC1Q8IUR5 882 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 C12orf76Q8N812 135 aaPredicted RBP3.93□□□□□ -1.78
LSM6-205ENST00000507449 IL17REQ8NFR9 667 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 GLMPQ8WWB7 406 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 TBC1D5Q92609 795 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 REPS1Q96D71 796 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 EIF3CQ99613 913 aaKnown RBP3.93□□□□□ -1.78
LSM6-205ENST00000507449 EIF2AK1Q9BQI3 630 aaKnown RBP3.93□□□□□ -1.78
LSM6-205ENST00000507449 HERC2P3Q9BVR0 1158 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms