RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SLC25A11Q02978 314 aaKnown RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 NNTQ13423 1086 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 CBX2Q14781 532 aaPredicted RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 TRIP4Q15650 581 aaPredicted RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 NYAP1Q6ZVC0 841 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 NPAS3Q8IXF0 933 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 CMTM8Q8IZV2 173 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 SYCE1Q8N0S2 351 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 CCDC185Q8N715 623 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 ADAMTS19Q8TE59 1207 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 SUSD6Q92537 303 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 CD101Q93033 1021 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 WBP2Q969T9 261 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 RIPOR3Q96MK2 946 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 ALS2CR12Q96Q35 445 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 WDR24Q96S15 920 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 NACA2Q9H009 215 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 SMG9Q9H0W8 520 aaKnown RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 POMKQ9H5K3 350 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 SLITRK6Q9H5Y7 841 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 ANLNQ9NQW6 1124 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 TMPRSS4Q9NRS4 437 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 GKN1Q9NS71 199 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 SMPD4Q9NXE4 827 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 PCSK1NQ9UHG2 260 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 USP18Q9UMW8 372 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 PACSIN2Q9UNF0 486 aaPredicted RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 TLR6Q9Y2C9 796 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 USP15Q9Y4E8 981 aaPredicted RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 CPQQ9Y646 472 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 REV3LO60673 3130 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 A0A0C4DFX4 3053 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 GRXCR2A6NFK2 248 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 SOBPA7XYQ1 873 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 FANCGO15287 622 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 SPOPO43791 374 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 PRAMEF12O95522 483 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 F9P00740 461 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 CKMP06732 381 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 DESP17661 470 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 GJC1P36383 396 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 MTHFRP42898 656 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 SSR1P43307 286 aaKnown RBP14.75□□□□□ -0.05
RNF4-208ENST00000507247 MARCKSL1P49006 195 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 KCNQ1P51787 676 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 TBX4P57082 545 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 ZC3H12AQ5D1E8 599 aaKnown RBP14.75□□□□□ -0.05
RNF4-208ENST00000507247 SCYL2Q6P3W7 929 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 PEX26Q7Z412 305 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 FGF13Q92913 245 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 AMFRQ9UKV5 643 aa14.75□□□□□ -0.05
RNF4-208ENST00000507247 HBS1LQ9Y450 684 aaKnown RBP14.75□□□□□ -0.05
RNF4-208ENST00000507247 VCANP13611 3396 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 STC2O76061 302 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 IRF1P10914 325 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 TNNT1P13805 278 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 GNG11P61952 73 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 SMTNL2Q2TAL5 461 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 ATP13A4Q4VNC1 1196 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 MEI1Q5TIA1 1274 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 SND1Q7KZF4 910 aaKnown RBP eCLIP14.74□□□□□ -0.05
RNF4-208ENST00000507247 RIN3Q8TB24 985 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 KRT35Q92764 455 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 USP13Q92995 863 aaPredicted RBP14.74□□□□□ -0.05
RNF4-208ENST00000507247 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
RNF4-208ENST00000507247 MYADMQ96S97 322 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 SNRNP25Q9BV90 132 aaKnown RBP14.74□□□□□ -0.05
RNF4-208ENST00000507247 MAGEB5Q9BZ81 275 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 WDCPQ9H6R7 721 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 ZWILCHQ9H900 591 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 GPATCH2LQ9NWQ4 482 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 ARHGEF38Q9NXL2 777 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 XPO7Q9UIA9 1087 aaKnown RBP14.74□□□□□ -0.05
RNF4-208ENST00000507247 ZMYM5Q9UJ78 669 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 ARHGAP26Q9UNA1 814 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 CCL26Q9Y258 94 aa14.74□□□□□ -0.05
RNF4-208ENST00000507247 KIF26AQ9ULI4 1882 aaPredicted RBP14.74□□□□□ -0.05
RNF4-208ENST00000507247 KCNU1A8MYU2 1149 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 ESPNB1AK53 854 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 DDX3YO15523 660 aaKnown RBP14.73□□□□□ -0.05
RNF4-208ENST00000507247 MBTPS2O43462 519 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 PRPSAP2O60256 369 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 GREM1O60565 184 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 CTNNA2P26232 953 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 CCR1P32246 355 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 AVPR1AP37288 418 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 COG7P83436 770 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 RING1Q06587 406 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 SMAD4Q13485 552 aaKnown RBP14.73□□□□□ -0.05
RNF4-208ENST00000507247 PPP2R5DQ14738 602 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 CA9Q16790 459 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 HADHQ16836 314 aaKnown RBP14.73□□□□□ -0.05
RNF4-208ENST00000507247 BRMS1LQ5PSV4 323 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 ARID3BQ8IVW6 561 aaPredicted RBP14.73□□□□□ -0.05
RNF4-208ENST00000507247 ZSCAN18Q8TBC5 510 aaPredicted RBP14.73□□□□□ -0.05
RNF4-208ENST00000507247 HLA-CQ95604 372 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 RNF34Q969K3 372 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 NTAN1Q96AB6 310 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 PLD4Q96BZ4 506 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 ACSF2Q96CM8 615 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms