RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 GMIPQ9P107 970 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ASIC3Q9UHC3 531 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ASB3Q9Y575 518 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 KIAA1671Q9BY89 1806 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ZNF638Q14966 1978 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 BRCA2P51587 3418 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ADAM12O43184 909 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 CXCL14O95715 111 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 IGLV3-25P01717 112 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 APOEP02649 317 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 DNAJB2P25686 324 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 STIP1P31948 543 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ACTN2P35609 894 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 PTGIRP43119 386 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 EIF3EP60228 445 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 OTUD4Q01804 1114 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 CAV1Q03135 178 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 TAF10Q12962 218 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 PTK6Q13882 451 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 OTUD1Q5VV17 481 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 SLC9A4Q6AI14 798 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 TTC27Q6P3X3 843 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 CEP128Q6ZU80 1094 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 HDXQ7Z353 690 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 SCD5Q86SK9 330 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ZDHHC14Q8IZN3 488 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ELMOD1Q8N336 334 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 TTC9BQ8N6N2 239 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 CCDC185Q8N715 623 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ATP6V0D2Q8N8Y2 350 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 KLHL23Q8NBE8 558 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ADAM32Q8TC27 787 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 GIPC2Q8TF65 315 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ATG4AQ8WYN0 398 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 SEC14L1Q92503 715 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 KCTD15Q96SI1 283 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 TSPYL1Q9H0U9 437 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 OSBPL2Q9H1P3 480 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 WDR6Q9NNW5 1121 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 DONSONQ9NYP3 566 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 TRPM5Q9NZQ8 1165 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 MTRF1LQ9UGC7 380 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 TLR6Q9Y2C9 796 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 R3HDM2Q9Y2K5 976 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 YIPF1Q9Y548 306 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 RAD54BQ9Y620 910 aa12.47□□□□□ -0.41
POLR2J3-211ENST00000506060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 H7C0C1 242 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 SGK1O00141 431 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 ZMYND10O75800 440 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 VNN2O95498 520 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 C1RP00736 705 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 CD48P09326 243 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 RARGP13631 454 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 ITIH2P19823 946 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 SERPINB6P35237 376 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 TNNT3P45378 269 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 ATP5OP48047 213 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 KCNJ1P48048 391 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 ATXN1P54253 815 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 TPI1P60174 286 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 PITX1P78337 314 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 XRCC4Q13426 336 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 NOMO1Q15155 1222 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 CA9Q16790 459 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 RAB6CQ53S08 254 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 PDE12Q6L8Q7 609 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 ELMSAN1Q6PJG2 1045 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 C4orf22Q6V702 233 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 RTL10Q7L3V2 364 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 CDKL3Q8IVW4 592 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 PLD5Q8N7P1 536 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 SLC35B2Q8TB61 432 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 CASKIN2Q8WXE0 1202 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 TRMT2BQ96GJ1 504 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 SNF8Q96H20 258 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 ZNF512Q96ME7 567 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 CSPG4P5Q96PW8 444 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 HERPUD2Q9BSE4 406 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 TRIM51Q9BSJ1 452 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 NACA2Q9H009 215 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 TKTL2Q9H0I9 626 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 RAB6CQ9H0N0 254 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 ENTPD7Q9NQZ7 604 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 WHRNQ9P202 907 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 DNPEPQ9ULA0 475 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 MAGED2Q9UNF1 606 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 IRAK3Q9Y616 596 aa12.46□□□□□ -0.41
POLR2J3-211ENST00000506060 GREB1Q4ZG55 1949 aa12.46□□□□□ -0.42
POLR2J3-211ENST00000506060 COL4A4P53420 1690 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms