RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 AK5Q9Y6K8 562 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 ACACAQ13085 2346 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 NBEAQ8NFP9 2946 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 A0A1B0GVT2 93 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 KCNJ18B7U540 433 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 IKBKBO14920 756 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 ATXN7O15265 892 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 RNASEH1O60930 286 aaKnown RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 ATP5BP06576 529 aaKnown RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 CYP2J2P51589 502 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 RACK1P63244 317 aaKnown RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 ILKQ13418 452 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 ZNF234Q14588 700 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 SLC39A14Q15043 492 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 PTPRNQ16849 979 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 KIF19Q2TAC6 998 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 MPPE1Q53F39 396 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 FAM26FQ5R3K3 315 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 FYB2Q5VWT5 728 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 CNNM4Q6P4Q7 775 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 Q6ZNB5 142 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 CACTIN-AS1Q8N1I8 211 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 CPXM2Q8N436 756 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 C1orf216Q8TAB5 229 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 SLC2A14Q8TDB8 520 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 WFIKKN2Q8TEU8 576 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 DDI1Q8WTU0 396 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 CYFIP2Q96F07 1278 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 DCBLD2Q96PD2 775 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 HNRNPABQ99729 332 aaKnown RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 SMOQ99835 787 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 NT5C1AQ9BXI3 368 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 ACE2Q9BYF1 805 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 IRX2Q9BZI1 471 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 UBXN6Q9BZV1 441 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 NRSN2Q9GZP1 204 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 SLC6A17Q9H1V8 727 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 LHX5Q9H2C1 402 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 ZSCAN16Q9H4T2 348 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-210ENST00000505589 MAGEF1Q9HAY2 307 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 IL21RQ9HBE5 538 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 TMEM30AQ9NV96 361 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 PLK2Q9NYY3 685 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 NAGPAQ9UK23 515 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 NME7Q9Y5B8 376 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 CLIC4Q9Y696 253 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 PLXNB3Q9ULL4 1909 aa10.4□□□□□ -0.74
NEDD9-210ENST00000505589 CLIC2O15247 247 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 TGFB1I1O43294 461 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 STC2O76061 302 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 LDOC1O95751 146 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 C4BPAP04003 597 aaKnown RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 ITGAVP06756 1048 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 SLFN14P0C7P3 912 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 C7P10643 843 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 ABCB4P21439 1286 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 EIF2S3P41091 472 aaKnown RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 HARS2P49590 506 aaKnown RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 COPAP53621 1224 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 ASIC1P78348 528 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 CLDN10P78369 228 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 CAMK2GQ13555 558 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 KNOP1Q1ED39 458 aaKnown RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 SLC45A4Q5BKX6 768 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 CCDC186Q7Z3E2 898 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 GPR155Q7Z3F1 870 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 OXR1Q8N573 874 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 ADAM32Q8TC27 787 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 PARD3BQ8TEW8 1205 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 TMEM174Q8WUU8 243 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 ZNF516Q92618 1163 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 PIWIL1Q96J94 861 aaKnown RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 CLIC6Q96NY7 704 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 TRIM9Q9C026 710 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 CYP3A43Q9HB55 503 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 TM9SF3Q9HD45 589 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 OLA1Q9NTK5 396 aaKnown RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 KBTBD4Q9NVX7 518 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-210ENST00000505589 SNX11Q9Y5W9 270 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 LOC400499M0QZD8 3231 aa10.39□□□□□ -0.75
NEDD9-210ENST00000505589 CELSR3Q9NYQ7 3312 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 PVALEFA0A1B0GWK0 134 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 A0A1W2PQH9 124 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 VPS37CA5D8V6 355 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-210ENST00000505589 ENC1O14682 589 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 TSPAN3O60637 253 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 MAGEC1O60732 1142 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 KIF20AO95235 890 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 SEMA4FO95754 770 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 ACTN2P35609 894 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 ARRB1P49407 418 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-210ENST00000505589 KIF11P52732 1056 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 NDST1P52848 882 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 RTP5Q14D33 572 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 GEN1Q17RS7 908 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 KMT5BQ4FZB7 885 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 DHRS13Q6UX07 377 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 USP30Q70CQ3 517 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms