RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ERI2A8K979 691 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 EEF2KO00418 725 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 TM9SF1O15321 606 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 DGKIO75912 1065 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 RBL1P28749 1068 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 COG7P83436 770 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 CA9Q16790 459 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 NCBP2-AS2Q69YL0 99 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 PM20D1Q6GTS8 502 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 C3orf62Q6ZUJ4 267 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 SRRM1Q8IYB3 904 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 GBP7Q8N8V2 638 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ADAM2Q99965 735 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 AGO3Q9H9G7 860 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 DNAJB2P25686 324 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 CNTFP26441 200 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 MTA1Q13330 715 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ANKRD22Q5VYY1 191 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 DCP1BQ8IZD4 617 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 CLEC4CQ8WTT0 213 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 POC1B-GALNT4F8VUJ3 575 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 B3GAT3O94766 335 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ACAT1P24752 427 aaKnown RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ADRA1BP35368 520 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 MAGEA9P43362 315 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 SERPINB9P50453 376 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 PRKD1Q15139 912 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-205ENST00000505458 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 BRMS1LQ5PSV4 323 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 OVOS1Q6IE37 1185 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 KCNT2Q6UVM3 1135 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 SLC24A5Q71RS6 500 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 PRUNE1Q86TP1 453 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ARHGAP18Q8N392 663 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 MDM1Q8TC05 714 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 MYLPFQ96A32 169 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 SMOQ99835 787 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 ARHGAP39Q9C0H5 1083 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 FNIP2Q9P278 1114 aa11.72□□□□□ -0.53
NFKB1-205ENST00000505458 FRMPD3Q5JV73 1810 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 MYO1CO00159 1063 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 CPP00450 1065 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 INHBAP08476 426 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 FOXR1Q6PIV2 292 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 C6orf89Q6UWU4 347 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 PIGWQ7Z7B1 504 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 CCDC185Q8N715 623 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 PPP1R13LQ8WUF5 828 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 FUBP3Q96I24 572 aaKnown RBP eCLIP11.71□□□□□ -0.53
NFKB1-205ENST00000505458 PWWP2AQ96N64 755 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 PAFAH2Q99487 392 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 PRMT1Q99873 361 aaKnown RBP11.71□□□□□ -0.53
NFKB1-205ENST00000505458 ELAC1Q9H777 363 aaKnown RBP11.71□□□□□ -0.53
NFKB1-205ENST00000505458 DTLQ9NZJ0 730 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 FBXW11Q9UKB1 542 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 PSMD3O43242 534 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 SUN1O94901 812 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.53
NFKB1-205ENST00000505458 GPX6P59796 221 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 DPYSQ14117 519 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 SEPT7Q16181 437 aaKnown RBP11.71□□□□□ -0.53
NFKB1-205ENST00000505458 NFE2Q16621 373 aaPredicted RBP11.71□□□□□ -0.53
NFKB1-205ENST00000505458 FNBP1LQ5T0N5 605 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 ITPRIPL1Q6GPH6 555 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 RFX8Q6ZV50 586 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 FAM131BQ86XD5 332 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 IGSF9Q9P2J2 1179 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 TRHDEQ9UKU6 1024 aa11.71□□□□□ -0.53
NFKB1-205ENST00000505458 ATP2C2O75185 946 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 KRT37O76014 449 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 MAGEA3P43357 314 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 TPI1P60174 286 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 PARP6Q2NL67 630 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 SLC43A3Q8NBI5 491 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 SLC7A14Q8TBB6 771 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 RAET1EQ8TD07 263 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 FBF1Q8TES7 1133 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 LPPQ93052 612 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 KDM4CQ9H3R0 1056 aa11.71□□□□□ -0.54
NFKB1-205ENST00000505458 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.54
NFKB1-205ENST00000505458 PTPRDP23468 1912 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 CASTOR2A6NHX0 329 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 SYN3O14994 580 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 HOXA2O43364 376 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 HCRTO43612 131 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 GSTA1P08263 222 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 YWHAGP61981 247 aaKnown RBP eCLIP11.7□□□□□ -0.54
NFKB1-205ENST00000505458 SMARCB1Q12824 385 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 DNAJC3Q13217 504 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 FASTKD3Q14CZ7 662 aaKnown RBP11.7□□□□□ -0.54
NFKB1-205ENST00000505458 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms