RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CSE1LP55060 971 aaKnown RBP14.53□□□□□ -0.08
TCOF1-207ENST00000504761 UGP2Q16851 508 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 TTC39BQ5VTQ0 682 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-207ENST00000504761 GBP7Q8N8V2 638 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-207ENST00000504761 CDHR5Q9HBB8 845 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 DDX3YO15523 660 aaKnown RBP14.52□□□□□ -0.08
TCOF1-207ENST00000504761 SHBGP04278 402 aa14.52□□□□□ -0.08
TCOF1-207ENST00000504761 GLRBP48167 497 aa14.52□□□□□ -0.08
TCOF1-207ENST00000504761 LDLRAD1Q5T700 205 aa14.52□□□□□ -0.08
TCOF1-207ENST00000504761 C4orf22Q6V702 233 aa14.52□□□□□ -0.08
TCOF1-207ENST00000504761 SEC16BQ96JE7 1060 aa14.52□□□□□ -0.08
TCOF1-207ENST00000504761 FRMD8Q9BZ67 464 aaPredicted RBP14.52□□□□□ -0.08
TCOF1-207ENST00000504761 HIPK3Q9H422 1215 aa14.52□□□□□ -0.08
TCOF1-207ENST00000504761 ACTR5Q9H9F9 607 aaPredicted RBP14.52□□□□□ -0.08
TCOF1-207ENST00000504761 SFMBT1Q9UHJ3 866 aa14.52□□□□□ -0.08
TCOF1-207ENST00000504761 hCG_1818297A0A087WSY0 165 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 FSCN2O14926 492 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 LRCH4O75427 683 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 CHEK2O96017 543 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 INHAP05111 366 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 NFKBIAP25963 317 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 RPL22P35268 128 aaKnown RBP14.52□□□□□ -0.09
TCOF1-207ENST00000504761 EPHB3P54753 998 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 FBXL18Q96ME1 805 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 DUSP16Q9BY84 665 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 IARS2Q9NSE4 1012 aaKnown RBP14.52□□□□□ -0.09
TCOF1-207ENST00000504761 STK25O00506 426 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 FGFR1P11362 822 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 PLD1Q13393 1074 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 PDAP1Q13442 181 aaKnown RBP14.52□□□□□ -0.09
TCOF1-207ENST00000504761 ZRANB3Q5FWF4 1079 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 MARC1Q5VT66 337 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 LRRC38Q5VT99 294 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 MRPL9Q9BYD2 267 aaKnown RBP14.52□□□□□ -0.09
TCOF1-207ENST00000504761 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 MYH7P12883 1935 aa14.52□□□□□ -0.09
TCOF1-207ENST00000504761 MGAT1P26572 445 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 RPL9P32969 192 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ALDH18A1P54886 795 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 KDSRQ06136 332 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 PTK6Q13882 451 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 XYLT1Q86Y38 959 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 TTC30BQ8N4P2 665 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 SERPINB11Q96P15 392 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 TWNKQ96RR1 684 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 FAM129AQ9BZQ8 928 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 LATS2Q9NRM7 1088 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 MYBPHLA2RUH7 354 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ZBTB22O15209 634 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 RAMP2O60895 175 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 RHOCP08134 193 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 KLRC2P26717 231 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 CHKAP35790 457 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ABCG1P45844 678 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 MRPS5P82675 430 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 GRIK3Q13003 919 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 TAS1R3Q7RTX0 852 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 USP6NLQ92738 828 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 NRDE2Q9H7Z3 1164 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 USP15Q9Y4E8 981 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 PTPRJQ12913 1337 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 SIPA1L3O60292 1781 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 WDR27A2RRH5 827 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ARL5CA6NH57 179 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 AP3B1O00203 1094 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 GEMP55040 296 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 OXCT1P55809 520 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 CHI3L2Q15782 390 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 KDM7AQ6ZMT4 941 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 LINC00523Q86TU6 105 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 LGI2Q8N0V4 545 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 DBF4BQ8NFT6 615 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 PPWD1Q96BP3 646 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ULK4Q96C45 1275 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 SNX27Q96L92 541 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 LHX5Q9H2C1 402 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 LRRC19Q9H756 370 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 CHST12Q9NRB3 414 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 PCYOX1Q9UHG3 505 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ARL2BPQ9Y2Y0 163 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 STX7O15400 261 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 RPSAP08865 295 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ST8SIA6P61647 398 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 RABGAP1LQ5R372 815 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 SLC24A5Q71RS6 500 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 YAF2Q8IY57 180 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 R3HDMLQ9H3Y0 253 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 LRRC40Q9H9A6 602 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 DDX20Q9UHI6 824 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 GABRQQ9UN88 632 aa14.51□□□□□ -0.09
TCOF1-207ENST00000504761 AAR2Q9Y312 384 aaKnown RBP14.51□□□□□ -0.09
TCOF1-207ENST00000504761 ATG7O95352 703 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 CD48P09326 243 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 PYGBP11216 843 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 FECHP22830 423 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 GJA5P36382 358 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 MATKP42679 507 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 NDUFV1P49821 464 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 DBN1Q16643 649 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 DCLRE1AQ6PJP8 1040 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms