RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 NUDT17P0C025 328 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 HSD17B3P37058 310 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 ADCY8P40145 1251 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 TUFMP49411 452 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 EIF3BP55884 814 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 ROR1Q01973 937 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 DHX9Q08211 1270 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 DPYSQ14117 519 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 BTBD8Q5XKL5 378 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 TRMT10CQ7L0Y3 403 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 GSTA5Q7RTV2 222 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 CDKL3Q8IVW4 592 aaPredicted RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 FBXO22Q8NEZ5 403 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 SCAMP5Q8TAC9 235 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 RNF139Q8WU17 664 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 OVCA2Q8WZ82 227 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 OLFM3Q96PB7 478 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 ADAM7Q9H2U9 754 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 PABPC3Q9H361 631 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 USP29Q9HBJ7 922 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 OLA1Q9NTK5 396 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 DDIT4Q9NX09 232 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMNA-220ENST00000504687 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
LMNA-220ENST00000504687 TPX2Q9ULW0 747 aaKnown RBP13.78□□□□□ -0.2
LMNA-220ENST00000504687 H0YGN5 161 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 ABLIM3O94929 683 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 SYF2O95926 243 aaKnown RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 ZDHHC11BP0C7U3 371 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 CPB1P15086 417 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 YWHAQP27348 245 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 HOXC13P31276 330 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 PPM1AP35813 382 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 ITGA8P53708 1063 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 DYNLT1P63172 113 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 CREMQ03060 361 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 PPIGQ13427 754 aaKnown RBP eCLIP13.77□□□□□ -0.213e-17■■□□□ 12
LMNA-220ENST00000504687 UAP1Q16222 522 aaPredicted RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 PSMD5Q16401 504 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 P3H1Q32P28 736 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 HSP90B2PQ58FF3 399 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 PPP6R3Q5H9R7 873 aaPredicted RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 SNX30Q5VWJ9 437 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 NCBP2-AS2Q69YL0 99 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 DENND5BQ6ZUT9 1274 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 TAS1R1Q7RTX1 841 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 CROCCP2Q86T23 111 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 TAC4Q86UU9 113 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 SCN4BQ8IWT1 228 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 COLGALT1Q8NBJ5 622 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 RSAD2Q8WXG1 361 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 SERPINB11Q96P15 392 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 TMEM121Q9BTD3 319 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 BRD8Q9H0E9 1235 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 WDCPQ9H6R7 721 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 FAM204AQ9H8W3 233 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 ARHGEF4Q9NR80 690 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 AFF4Q9UHB7 1163 aaKnown RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
LMNA-220ENST00000504687 NFS1Q9Y697 457 aa13.77□□□□□ -0.21
LMNA-220ENST00000504687 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 SGK1O00141 431 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 DCLK1O15075 740 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 EIF3HO15372 352 aaKnown RBP eCLIP13.76□□□□□ -0.21
LMNA-220ENST00000504687 NCAM2O15394 837 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 UPP2O95045 317 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 SLC2A3P11169 496 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 GOT1P17174 413 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 MAGEA6P43360 314 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 RABGGTBP53611 331 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 PMS2P54278 862 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 DEFB103AP81534 67 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 ZNF33AQ06730 810 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 NME3Q13232 169 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 SLC45A4Q5BKX6 768 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 RNASEH2BQ5TBB1 312 aaKnown RBP13.76□□□□□ -0.21
LMNA-220ENST00000504687 IZUMO3Q5VZ72 239 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 RFX8Q6ZV50 586 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
LMNA-220ENST00000504687 ATAD1Q8NBU5 361 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 ZNF461Q8TAF7 563 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 SLC39A13Q96H72 371 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 TMEM169Q96HH4 297 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 C1orf74Q96LT6 269 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 GDAP1L1Q96MZ0 367 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 ZIM3Q96PE6 472 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 QKIQ96PU8 341 aaKnown RBP eCLIP13.76□□□□□ -0.21
LMNA-220ENST00000504687 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
LMNA-220ENST00000504687 FRMD8Q9BZ67 464 aaPredicted RBP13.76□□□□□ -0.21
LMNA-220ENST00000504687 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms