RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 BMP8BP34820 402 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 ADRA1BP35368 520 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 PAFAH1B1P43034 410 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 CDH6P55285 790 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 NME3Q13232 169 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 DPYSQ14117 519 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 FAM72AQ5TYM5 149 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 BTBD8Q5XKL5 378 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 SLC9A4Q6AI14 798 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 FAM72DQ6L9T8 149 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 SCYL2Q6P3W7 929 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 SPATA31D4Q6ZUB0 917 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 BBS12Q6ZW61 710 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 TMC7Q7Z402 723 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 ADGRD2Q7Z7M1 963 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 FAM72BQ86X60 149 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 PSTKQ8IV42 348 aaKnown RBP10.8□□□□□ -0.68
TPM3-217ENST00000504663 ZNF683Q8IZ20 524 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 PLD5Q8N7P1 536 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 ATG4AQ8WYN0 398 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 KRT12Q99456 494 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 ZNF670Q9BS34 389 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 TRIM62Q9BVG3 475 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 DCLK3Q9C098 648 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 LRRC19Q9H756 370 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 CCSER2Q9H7U1 834 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 FAM204AQ9H8W3 233 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 ENTPD7Q9NQZ7 604 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.8□□□□□ -0.68
TPM3-217ENST00000504663 DDIT4Q9NX09 232 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 DMGDHQ9UI17 866 aaKnown RBP10.8□□□□□ -0.68
TPM3-217ENST00000504663 XPO7Q9UIA9 1087 aaKnown RBP10.8□□□□□ -0.68
TPM3-217ENST00000504663 NEU2Q9Y3R4 380 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 MFHAS1Q9Y4C4 1052 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 SNX10Q9Y5X0 201 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 SYNJ2BP-COX16A0A087WUM0 186 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 ZSCAN5CA6NGD5 496 aaPredicted RBP10.79□□□□□ -0.68
TPM3-217ENST00000504663 KRIT1O00522 736 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 CAPN9O14815 690 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 OLFM2O95897 454 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 C1RP00736 705 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 OAS1P00973 400 aaKnown RBP10.79□□□□□ -0.68
TPM3-217ENST00000504663 ADH1AP07327 375 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 CSH1P0DML2 217 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 CSH2P0DML3 217 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 HOXC13P31276 330 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 PLD1Q13393 1074 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 NNTQ13423 1086 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 GPM6BQ13491 265 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 KCNC3Q14003 757 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 PDK2Q15119 407 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 OASLQ15646 514 aaKnown RBP10.79□□□□□ -0.68
TPM3-217ENST00000504663 ANKRD20A8PQ5CZ79 823 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 DNAJB7Q7Z6W7 309 aaPredicted RBP10.79□□□□□ -0.68
TPM3-217ENST00000504663 CCDC50Q8IVM0 306 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 ARHGAP18Q8N392 663 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 KREMEN2Q8NCW0 462 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 SLC35B2Q8TB61 432 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 C1orf54Q8WWF1 131 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 SLCO2A1Q92959 643 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 ZFRQ96KR1 1074 aaKnown RBP10.79□□□□□ -0.68
TPM3-217ENST00000504663 CSPG4P5Q96PW8 444 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 RNF157Q96PX1 679 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 LRRC1Q9BTT6 524 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 TLR8Q9NR97 1041 aaKnown RBP10.79□□□□□ -0.68
TPM3-217ENST00000504663 ETNK2Q9NVF9 386 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 CWC15Q9P013 229 aaKnown RBP10.79□□□□□ -0.68
TPM3-217ENST00000504663 COX16Q9P0S2 106 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 CHD5Q8TDI0 1954 aa10.79□□□□□ -0.68
TPM3-217ENST00000504663 NYNRINQ9P2P1 1898 aaKnown RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 DCLK1O15075 740 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 TLR5O60602 858 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 MOSPD3O75425 235 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 CSPG5O95196 566 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 GLUD1P00367 558 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 C8AP07357 584 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 EPCAMP16422 314 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 GOT1P17174 413 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 ECHS1P30084 290 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 COILP38432 576 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 GGCXP38435 758 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 TUBP50607 506 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 EPHA5P54756 1037 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 AIF1P55008 147 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 PPP2R5DQ14738 602 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 TRIP4Q15650 581 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 BRMS1LQ5PSV4 323 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 PIK3R6Q5UE93 754 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 KAZNQ674X7 775 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 NCBP2-AS2Q69YL0 99 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 DRICH1Q6PGQ1 229 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 KLHDC10Q6PID8 442 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 NPNTQ6UXI9 565 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 GAREM2Q75VX8 874 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 KLHL7Q8IXQ5 586 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 PDZD8Q8NEN9 1154 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 VN1R2Q8NFZ6 395 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 ADAMTS19Q8TE59 1207 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms