RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TAF3Q5VWG9 929 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 EGFLAMQ63HQ2 1017 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 KBTBD6Q86V97 674 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 SLC47A2Q86VL8 602 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 CAMKK1Q8N5S9 505 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 FAM160A2Q8N612 972 aaPredicted RBP14.87□□□□□ -0.03
HOXC9-202ENST00000504557 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
HOXC9-202ENST00000504557 ENOX1Q8TC92 643 aaKnown RBP14.87□□□□□ -0.03
HOXC9-202ENST00000504557 HMGB4Q8WW32 186 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 GAB3Q8WWW8 586 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 IRGQQ8WZA9 623 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 ANO10Q9NW15 660 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 MARK1Q9P0L2 795 aa14.87□□□□□ -0.03
HOXC9-202ENST00000504557 HBS1LQ9Y450 684 aaKnown RBP14.87□□□□□ -0.03
HOXC9-202ENST00000504557 SYNJ2BP-COX16A0A087WUM0 186 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 GOLGA6L7A0A1B0GV03 622 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 TCRBV21S2A2A0A5A6 115 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 PRRT4C9JH25 899 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 MOCS2O96007 188 aaPredicted RBP14.86□□□□□ -0.03
HOXC9-202ENST00000504557 HOXA6P31267 233 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 CNR2P34972 360 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 ACADSBP45954 432 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 TBX4P57082 545 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 PDCLQ13371 301 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 KRT31Q15323 416 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 TRIP4Q15650 581 aaPredicted RBP14.86□□□□□ -0.03
HOXC9-202ENST00000504557 EOGTQ5NDL2 527 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 LAIR1Q6GTX8 287 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 RFWD3Q6PCD5 774 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 RBM43Q6ZSC3 357 aaKnown RBP14.86□□□□□ -0.03
HOXC9-202ENST00000504557 CHPFQ8IZ52 775 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 SCML4Q8N228 414 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 MDGA1Q8NFP4 955 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 RLN3Q8WXF3 142 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 PCMTD1Q96MG8 357 aaPredicted RBP14.86□□□□□ -0.03
HOXC9-202ENST00000504557 ACOX2Q99424 681 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 SYNCQ9H7C4 482 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 POLMQ9NP87 494 aaPredicted RBP14.86□□□□□ -0.03
HOXC9-202ENST00000504557 COX16Q9P0S2 106 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 TMEM63CQ9P1W3 806 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 CLEC4EQ9ULY5 219 aa14.86□□□□□ -0.03
HOXC9-202ENST00000504557 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
HOXC9-202ENST00000504557 ADAM23O75077 832 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 GRAP2O75791 330 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 HOXB2P14652 356 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
HOXC9-202ENST00000504557 CLCN1P35523 988 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 TAF5Q15542 800 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 CT47A1Q5JQC4 288 aaPredicted RBP14.85□□□□□ -0.03
HOXC9-202ENST00000504557 FKBP15Q5T1M5 1219 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 KLHDC7AQ5VTJ3 777 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 FYB2Q5VWT5 728 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 SYPL2Q5VXT5 272 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 OR6B2Q6IFH4 312 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 CAVIN1Q6NZI2 390 aaKnown RBP14.85□□□□□ -0.03
HOXC9-202ENST00000504557 MSANTD2Q6P1R3 559 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 DQX1Q8TE96 717 aaKnown RBP14.85□□□□□ -0.03
HOXC9-202ENST00000504557 PIWIL1Q96J94 861 aaKnown RBP14.85□□□□□ -0.03
HOXC9-202ENST00000504557 CPXM1Q96SM3 734 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 SLC4A5Q9BY07 1137 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 FAM207AQ9NSI2 230 aaPredicted RBP14.85□□□□□ -0.03
HOXC9-202ENST00000504557 STIM2Q9P246 746 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 RAD54BQ9Y620 910 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 SPTBN4Q9H254 2564 aa14.85□□□□□ -0.03
HOXC9-202ENST00000504557 FRYLO94915 3013 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 A0A0A0MRY4 1105 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 SART1O43290 800 aaKnown RBP14.84□□□□□ -0.03
HOXC9-202ENST00000504557 ALDH1A2O94788 518 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 PENKP01210 267 aaPredicted RBP14.84□□□□□ -0.03
HOXC9-202ENST00000504557 FYNP06241 537 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 CISD3P0C7P0 127 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 SGSHP51688 502 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 MYL5Q02045 173 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 TYRO3Q06418 890 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 GEN1Q17RS7 908 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 CDKAL1Q5VV42 579 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 SDE2Q6IQ49 451 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 CACNA2D4Q7Z3S7 1137 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 TRMT11Q7Z4G4 463 aaKnown RBP14.84□□□□□ -0.03
HOXC9-202ENST00000504557 TAC4Q86UU9 113 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 WDTC1Q8N5D0 677 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 PPP1R13BQ96KQ4 1090 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 NOX5Q96PH1 765 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 CIPCQ9C0C6 399 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 PARD6AQ9NPB6 346 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 CACNA2D2Q9NY47 1150 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 HCN2Q9UL51 889 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 CEP83Q9Y592 693 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 GON4LQ3T8J9 2241 aa14.84□□□□□ -0.03
HOXC9-202ENST00000504557 WASH3PC4AMC7 463 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 TBL1XO60907 577 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 ERBB2P04626 1255 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 UCHL3P15374 230 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 NTSR1P30989 418 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 SLC6A4P31645 630 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 SLC11A2P49281 568 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 COPB1P53618 953 aaKnown RBP14.83□□□□□ -0.04
HOXC9-202ENST00000504557 POLR2FP61218 127 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms