RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 SPATA21Q7Z572 469 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 MAP7D3Q8IWC1 876 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 ATP11CQ8NB49 1132 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 RNF149Q8NC42 400 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 TEKT4Q8WW24 435 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 PRCCQ92733 491 aaPredicted RBP9.18□□□□□ -0.94
CASC9-201ENST00000504531 LRRC39Q96DD0 335 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 RTP4Q96DX8 246 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 ELAC2Q9BQ52 826 aaKnown RBP9.18□□□□□ -0.94
CASC9-201ENST00000504531 CNPY3Q9BT09 278 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
CASC9-201ENST00000504531 HEMGNQ9BXL5 484 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 CEP41Q9BYV8 373 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 MTMR12Q9C0I1 747 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 DNAI2Q9GZS0 605 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 VPS11Q9H270 941 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 RABEP2Q9H5N1 569 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 PLEKHA5Q9HAU0 1116 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 LRRC4CQ9HCJ2 640 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 ERAP1Q9NZ08 941 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 GGA3Q9NZ52 723 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 KLHL14Q9P2G3 628 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 PSMC3IPQ9P2W1 217 aaPredicted RBP9.18□□□□□ -0.94
CASC9-201ENST00000504531 ITGA11Q9UKX5 1188 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 SLC45A1Q9Y2W3 748 aa9.18□□□□□ -0.94
CASC9-201ENST00000504531 EXOC1LA0A1B0GW35 172 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 TCP11X1B4DZS4 312 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 RASA4BC9J798 803 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 F8VP50 259 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 NOP56O00567 594 aaKnown RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 TRDMT1O14717 391 aaKnown RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 GIPC1O14908 333 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 PPP1R12AO14974 1030 aaPredicted RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 RASA4O43374 803 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 CILPO75339 1184 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 CNMDO75829 334 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 WISP1O95388 367 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 ATP5BP06576 529 aaKnown RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 CCNB1P14635 433 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 DESP17661 470 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 CD58P19256 250 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 TAC1P20366 129 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 PSMA2P25787 234 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 ALDH3A1P30838 453 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 ZNF143P52747 638 aaPredicted RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 GEMIN4P57678 1058 aaKnown RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 IRX3P78415 501 aaPredicted RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 PTPN11Q06124 597 aaPredicted RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 CDK18Q07002 472 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 GPS1Q13098 491 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 VGLL4Q14135 290 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 PDK4Q16654 411 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.17□□□□□ -0.94
CASC9-201ENST00000504531 ZBTB41Q5SVQ8 909 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 TMEM63BQ5T3F8 832 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 FBXW10Q5XX13 1052 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 LCLAT1Q6UWP7 414 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 XYLT1Q86Y38 959 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 ANKRD13AQ8IZ07 590 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 NAT8LQ8N9F0 302 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 CCDC63Q8NA47 563 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 CXorf38Q8TB03 319 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 SH3TC2Q8TF17 1288 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 TFAP2BQ92481 460 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 TMEM176AQ96HP8 235 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 MCEEQ96PE7 176 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 TMEM237Q96Q45 408 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 SMC6Q96SB8 1091 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 ASCC2Q9H1I8 757 aaPredicted RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 ACSS3Q9H6R3 686 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 VTA1Q9NP79 307 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 SAYSD1Q9NPB0 183 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 GTF2IRD1Q9UHL9 959 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 BARX2Q9UMQ3 279 aaPredicted RBP9.17□□□□□ -0.94
CASC9-201ENST00000504531 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.17□□□□□ -0.94
CASC9-201ENST00000504531 TELO2Q9Y4R8 837 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 ANK1P16157 1881 aa9.17□□□□□ -0.94
CASC9-201ENST00000504531 CLUHO75153 1309 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 CASP8AP2Q9UKL3 1982 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 LRRD1A4D1F6 860 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 TRAFD1O14545 582 aaPredicted RBP9.16□□□□□ -0.94
CASC9-201ENST00000504531 CHADO15335 359 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 TYROBPO43914 113 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 LRCH4O75427 683 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 DCTN3O75935 186 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 ALX3O95076 343 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 TGDSO95455 350 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 C22orf31O95567 290 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 TRUB2O95900 331 aaKnown RBP9.16□□□□□ -0.94
CASC9-201ENST00000504531 B3GALT4O96024 378 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 FURINP09958 794 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 PECAM1P16284 738 aaPredicted RBP9.16□□□□□ -0.94
CASC9-201ENST00000504531 TGM2P21980 687 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 GCAP28676 217 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 RFC1P35251 1148 aaPredicted RBP9.16□□□□□ -0.94
CASC9-201ENST00000504531 TNFSF9P41273 254 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 GPD2P43304 727 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 SLCO1A2P46721 670 aa9.16□□□□□ -0.94
CASC9-201ENST00000504531 RASSF2P50749 326 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms