RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 HSPH1Q92598 858 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC7A6OSQ96CW6 309 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ANKRD36BP1Q96IX9 119 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 LRGUKQ96M69 825 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF577Q9BSK1 485 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 AGXT2Q9BYV1 514 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CRLF2Q9HC73 371 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SACM1LQ9NTJ5 587 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DDX18Q9NVP1 670 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POLLQ9UGP5 575 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SEPT9Q9UHD8 586 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 BAG5Q9UL15 447 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 GRID1Q9ULK0 1009 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 IFT52Q9Y366 437 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DUSP10Q9Y6W6 482 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SIPA1L1O43166 1804 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 COL4A5P29400 1685 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 GRXCR2A6NFK2 248 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 HMGB1P1B2RPK0 211 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TCP11X1B4DZS4 312 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 E7ENQ6 273 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PIK3R2O00459 728 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 BUD23O43709 281 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 USP1O94782 785 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ALX3O95076 343 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 LUC7L3O95232 432 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SERPING1P05155 500 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POLR2EP19388 210 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PBLDP30039 288 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 GARSP41250 739 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KLK7P49862 253 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PMS1P54277 932 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ART3Q13508 389 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 HNRNPDQ14103 355 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP2R5EQ16537 467 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 GPATCH4Q5T3I0 446 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP1R26Q5T8A7 1209 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NT5DC1Q5TFE4 455 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 C1orf146Q5VVC0 180 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP4R4Q6NUP7 873 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RSBN1LQ6PCB5 846 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ISLR2Q6UXK2 745 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 IDO2Q6ZQW0 420 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RGS9BPQ6ZS82 235 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CATSPER4Q7RTX7 472 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CLEC10AQ8IUN9 316 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NUDCD3Q8IVD9 361 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MMAAQ8IVH4 418 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 C4orf33Q8N1A6 199 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 AFAP1L2Q8N4X5 818 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC33Q8N5R6 958 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CCNYL1Q8N7R7 359 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ZFP28Q8NHY6 868 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC22A8Q8TCC7 542 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC26A7Q8TE54 656 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 EDARADDQ8WWZ3 215 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ALKBH8Q96BT7 664 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 HIC2Q96JB3 615 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NUDCD1Q96RS6 583 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 STRBPQ96SI9 672 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM56Q9BRZ2 755 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CELF4Q9BZC1 486 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC90BQ9GZT6 254 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 VPS11Q9H270 941 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CD209Q9NNX6 404 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP1R14DQ9NXH3 145 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ATPIF1Q9UII2 106 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ZMIZ1Q9ULJ6 1067 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DOLKQ9UPQ8 538 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RBMX2Q9Y388 322 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 LOC100653049A0A140TA62 436 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SPDYE2BA6NHP3 402 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 GOLGA8CPA6NN73 597 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 LGALS16A8MUM7 142 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MAPK13O15264 365 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PIP5K1CO60331 668 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DKC1O60832 514 aaKnown RBP eCLIP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KRT34O76011 436 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 GH2P01242 217 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CSF1RP07333 972 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SPDYE6P0CI01 402 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ALOX12P18054 663 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 IL10P22301 178 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TM4SF4P48230 202 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SERPINB4P48594 390 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MFAP3P55082 362 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NAA20P61599 178 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NOP14P78316 857 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM32Q13049 653 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DMP1Q13316 513 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TNFAIP8L3Q5GJ75 292 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KCNT1Q5JUK3 1230 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CIAPIN1Q6FI81 312 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 STYK1Q6J9G0 422 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAJC24Q6P3W2 148 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DSTYKQ6XUX3 929 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KDELC2Q7Z4H8 507 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SFR1Q86XK3 245 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RNF135Q8IUD6 432 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SP8Q8IXZ3 490 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms