RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 FECHP22830 423 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 CYLC1P35663 651 aaPredicted RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 SCNN1AP37088 669 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 GSCP56915 257 aaPredicted RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 RNASE9P60153 205 aaKnown RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 ZNF268Q14587 947 aaPredicted RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 ASTE1Q2TB18 679 aaPredicted RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 DNAJC24Q6P3W2 148 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 SLC26A9Q7LBE3 791 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 DNAAF5Q86Y56 855 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 CMTM8Q8IZV2 173 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 RNF139Q8WU17 664 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 EDEM1Q92611 657 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 SMARCD2Q92925 531 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 ZNF653Q96CK0 615 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 VCPIP1Q96JH7 1222 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 ZSWIM3Q96MP5 696 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 SELENOOQ9BVL4 669 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 SLC46A2Q9BY10 475 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 ISCUQ9H1K1 167 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 POPDC2Q9HBU9 364 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 METTL5Q9NRN9 209 aaKnown RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 OLA1Q9NTK5 396 aaKnown RBP10.48□□□□□ -0.73
NUP54-203ENST00000504173 SPTLC3Q9NUV7 552 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 ASNSD1Q9NWL6 643 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 RASAL2Q9UJF2 1139 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 NUDT5Q9UKK9 219 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 ANAPC1Q9H1A4 1944 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 DOCK8Q8NF50 2099 aa10.48□□□□□ -0.73
NUP54-203ENST00000504173 SOWAHDA6NJG2 315 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 DPYSL4O14531 572 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 MDM4O15151 490 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 NARSO43776 548 aaKnown RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 DAB1O75553 588 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 IPO7O95373 1038 aaKnown RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 OLFM2O95897 454 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 TBX18O95935 607 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 PTMAP06454 111 aaKnown RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 MYBL1P10243 752 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 ABCB4P21439 1286 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 RRM1P23921 792 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 ATP5C1P36542 298 aaKnown RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 YWHAZP63104 245 aaKnown RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 EFEMP1Q12805 493 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 TAF5Q15542 800 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 DCAF6Q58WW2 860 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 FAM78AQ5JUQ0 283 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 KLHDC10Q6PID8 442 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 POTEHQ6S545 545 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 MTSS1LQ765P7 747 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 BEND5Q7L4P6 421 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 ARID3BQ8IVW6 561 aaPredicted RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 CCDC170Q8IYT3 715 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 DEFB106AQ8N104 65 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 ZNF276Q8N554 614 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 C3orf20Q8ND61 904 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 TTC16Q8NEE8 873 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 PJA1Q8NG27 643 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 ASB16Q96NS5 453 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 SLC22A12Q96S37 553 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 CYP2S1Q96SQ9 504 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 RNF38Q9H0F5 515 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 SMG9Q9H0W8 520 aaKnown RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 MARCH2Q9P0N8 246 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 EPS15L1Q9UBC2 864 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 CNOT8Q9UFF9 292 aaKnown RBP10.47□□□□□ -0.73
NUP54-203ENST00000504173 DNMT3LQ9UJW3 386 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 NENFQ9UMX5 172 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 NAALADL1Q9UQQ1 740 aa10.47□□□□□ -0.73
NUP54-203ENST00000504173 ANKRD62A6NC57 917 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 ATMINO43313 823 aaPredicted RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 NRDCO43847 1150 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 FOXD2O60548 495 aaPredicted RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 GJB6O95452 261 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 PRAMEF12O95522 483 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 FYNP06241 537 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 H2AFZP0C0S5 128 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 SRFP11831 508 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 KRT3P12035 628 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 WEE1P30291 646 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 GALCP54803 685 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 SLC7A9P82251 487 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 SPEM2Q0P670 501 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 SPA17Q15506 151 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 SOWAHCQ53LP3 525 aaPredicted RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 MSANTD2Q6P1R3 559 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 H2AFVQ71UI9 128 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 MIB1Q86YT6 1006 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 TMEM139Q8IV31 216 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 ST13P5Q8NFI4 369 aaPredicted RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 DQX1Q8TE96 717 aaKnown RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 USP13Q92995 863 aaPredicted RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 SLC2A13Q96QE2 648 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 THAP2Q9H0W7 228 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 KIF9Q9HAQ2 790 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 ZFP14Q9HCL3 533 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 LUC7LQ9NQ29 371 aaKnown RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 TDP1Q9NUW8 608 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms