RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 AGMOQ6ZNB7 445 aa12□□□□□ -0.49
USP46-204ENST00000503060 PAQR9Q6ZVX9 377 aa12□□□□□ -0.49
USP46-204ENST00000503060 ZBED8Q8IZ13 594 aa12□□□□□ -0.49
USP46-204ENST00000503060 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 AGO3Q9H9G7 860 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 CPSF2Q9P2I0 782 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 GIT1Q9Y2X7 761 aa12□□□□□ -0.49
USP46-204ENST00000503060 TMEM98Q9Y2Y6 226 aa12□□□□□ -0.49
USP46-204ENST00000503060 SGTAO43765 313 aa12□□□□□ -0.49
USP46-204ENST00000503060 NPR3P17342 541 aa12□□□□□ -0.49
USP46-204ENST00000503060 THPOP40225 353 aa12□□□□□ -0.49
USP46-204ENST00000503060 GJA8P48165 433 aa12□□□□□ -0.49
USP46-204ENST00000503060 ARL4CP56559 192 aa12□□□□□ -0.49
USP46-204ENST00000503060 BCAR1P56945 870 aa12□□□□□ -0.49
USP46-204ENST00000503060 ADCY1Q08828 1119 aa12□□□□□ -0.49
USP46-204ENST00000503060 ADIGQ0VDE8 80 aa12□□□□□ -0.49
USP46-204ENST00000503060 DPYSL2Q16555 572 aa12□□□□□ -0.49
USP46-204ENST00000503060 HIF1AQ16665 826 aa12□□□□□ -0.49
USP46-204ENST00000503060 PPP6R3Q5H9R7 873 aaPredicted RBP12□□□□□ -0.49
USP46-204ENST00000503060 MDH1BQ5I0G3 518 aa12□□□□□ -0.49
USP46-204ENST00000503060 HP1BP3Q5SSJ5 553 aaPredicted RBP12□□□□□ -0.49
USP46-204ENST00000503060 KIAA0319Q5VV43 1072 aa12□□□□□ -0.49
USP46-204ENST00000503060 B4GALNT4Q76KP1 1039 aa12□□□□□ -0.49
USP46-204ENST00000503060 MRPL10Q7Z7H8 261 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 SRLQ86TD4 932 aa12□□□□□ -0.49
USP46-204ENST00000503060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
USP46-204ENST00000503060 KLHDC9Q8NEP7 349 aa12□□□□□ -0.49
USP46-204ENST00000503060 FAM107BQ9H098 131 aa12□□□□□ -0.49
USP46-204ENST00000503060 INTS9Q9NV88 658 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 DDX43Q9NXZ2 648 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 EURLQ9NYK6 297 aa12□□□□□ -0.49
USP46-204ENST00000503060 NAALADL1Q9UQQ1 740 aa12□□□□□ -0.49
USP46-204ENST00000503060 ARL5CA6NH57 179 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 ALDH1A1P00352 501 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CCND3P30281 292 aaPredicted RBP11.99□□□□□ -0.49
USP46-204ENST00000503060 L1CAMP32004 1257 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CASP2P42575 452 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 MATKP42679 507 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 SCNN1GP51170 649 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CLCNKBP51801 687 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 GAD2Q05329 585 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 SEPT7Q16181 437 aaKnown RBP11.99□□□□□ -0.49
USP46-204ENST00000503060 KCNA10Q16322 511 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 STRADAQ7RTN6 431 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CCDC13Q8IYE1 715 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 DEFB106AQ8N104 65 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CYP4X1Q8N118 509 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 TMEM86AQ8N2M4 240 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 RIBC1Q8N443 379 aaPredicted RBP11.99□□□□□ -0.49
USP46-204ENST00000503060 TAB3Q8N5C8 712 aaPredicted RBP11.99□□□□□ -0.49
USP46-204ENST00000503060 KCTD13Q8WZ19 329 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 MED10Q9BTT4 135 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 OSBPL7Q9BZF2 842 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
USP46-204ENST00000503060 USP29Q9HBJ7 922 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 AP4E1Q9UPM8 1137 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 EXOC1LA0A1B0GW35 172 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 DAB1O75553 588 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 BEST1O76090 585 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 TMEM63AO94886 807 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CYP2F1P24903 491 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CD52P31358 61 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 NRLP54845 237 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 FNBP1LQ5T0N5 605 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CLEC20AQ6ZU45 233 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
USP46-204ENST00000503060 NRDE2Q9H7Z3 1164 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 VPS37BQ9H9H4 285 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 CRTAC1Q9NQ79 661 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 PADI3Q9ULW8 664 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 HEY1Q9Y5J3 304 aa11.99□□□□□ -0.49
USP46-204ENST00000503060 E7ESA3 106 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 TNFRSF10BO14763 440 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 BANF1O75531 89 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 CREB1P16220 341 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 RPL9P32969 192 aaKnown RBP11.98□□□□□ -0.49
USP46-204ENST00000503060 LHX1P48742 406 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 SULT1E1P49888 294 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 BASP1P80723 227 aaKnown RBP11.98□□□□□ -0.49
USP46-204ENST00000503060 MRPS5P82675 430 aaKnown RBP11.98□□□□□ -0.49
USP46-204ENST00000503060 CAP1Q01518 475 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 SLC25A52Q3SY17 297 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 MSS51Q4VC12 460 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 ACBD5Q5T8D3 534 aaPredicted RBP11.98□□□□□ -0.49
USP46-204ENST00000503060 VSTM1Q6UX27 236 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 DSTYKQ6XUX3 929 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 TDRPQ86YL5 185 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 ANKMY2Q8IV38 441 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 CCDC185Q8N715 623 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 C3orf58Q8NDZ4 430 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 FAM149B1Q96BN6 582 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 RTP4Q96DX8 246 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 UROC1Q96N76 676 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 KCTD15Q96SI1 283 aaPredicted RBP11.98□□□□□ -0.49
USP46-204ENST00000503060 SYT15Q9BQS2 421 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 LRRC4Q9HBW1 653 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 MTMR10Q9NXD2 777 aa11.98□□□□□ -0.49
USP46-204ENST00000503060 ZMYND8Q9ULU4 1186 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms