RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ABCC13Q9NSE7 274 aa22.81■■□□□ 1.24
PTPN13-205ENST00000502971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.81■■□□□ 1.24
PTPN13-205ENST00000502971 MICAL3Q7RTP6 2002 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 H7C4K7 107 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 CXCR3P49682 368 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 ZNF135P52742 658 aaPredicted RBP22.8■■□□□ 1.24
PTPN13-205ENST00000502971 YWHAGP61981 247 aaKnown RBP eCLIP22.8■■□□□ 1.24
PTPN13-205ENST00000502971 SMARCB1Q12824 385 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 AGBL2Q5U5Z8 902 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 NCBP2-AS2Q69YL0 99 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 ADAM32Q8TC27 787 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 TMEM109Q9BVC6 243 aa22.8■■□□□ 1.24
PTPN13-205ENST00000502971 TTC4O95801 387 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 AMPD1P23109 780 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 ACTN2P35609 894 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 RBM15Q96T37 977 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTPN13-205ENST00000502971 PHACTR1Q9C0D0 580 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 ARHGEF4Q9NR80 690 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 TMEM51Q9NW97 253 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 PSD3Q9NYI0 1048 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 VWA8A3KMH1 1905 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 FNDC1Q4ZHG4 1894 aaPredicted RBP22.79■■□□□ 1.24
PTPN13-205ENST00000502971 SHBGP04278 402 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 HCAR3P49019 387 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 GBE1Q04446 702 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 KRT71Q3SY84 523 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 BTBD8Q5XKL5 378 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 C4orf22Q6V702 233 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTPN13-205ENST00000502971 ANKS3Q6ZW76 656 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 TAC4Q86UU9 113 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 NUP93Q8N1F7 819 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 CPT1BQ92523 772 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 PRCCQ92733 491 aaPredicted RBP22.79■■□□□ 1.24
PTPN13-205ENST00000502971 WDCPQ9H6R7 721 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 PAK5Q9P286 719 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 HCSTQ9UBK5 93 aa22.79■■□□□ 1.24
PTPN13-205ENST00000502971 HACD1B0YJ81 288 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 EEF2KO00418 725 aaKnown RBP22.78■■□□□ 1.24
PTPN13-205ENST00000502971 KCNN4O15554 427 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 TBC1D4O60343 1298 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 IGLV3-25P01717 112 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 SLC10A2Q12908 348 aaPredicted RBP22.78■■□□□ 1.24
PTPN13-205ENST00000502971 SLC45A4Q5BKX6 768 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 NAT8LQ8N9F0 302 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 DQX1Q8TE96 717 aaKnown RBP22.78■■□□□ 1.24
PTPN13-205ENST00000502971 PWWP2AQ96N64 755 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 FBXO44Q9H4M3 255 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 TMPRSS4Q9NRS4 437 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 SCML2Q9UQR0 700 aa22.78■■□□□ 1.24
PTPN13-205ENST00000502971 KIAA0355O15063 1070 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 RBL1P28749 1068 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 SEMA3BQ13214 749 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 DPYSQ14117 519 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 KCTD16Q68DU8 428 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 RFX8Q6ZV50 586 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 SPPL2BQ8TCT7 592 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 C2orf15Q8WU43 125 aaKnown RBP22.77■■□□□ 1.24
PTPN13-205ENST00000502971 QKIQ96PU8 341 aaKnown RBP eCLIP22.77■■□□□ 1.24
PTPN13-205ENST00000502971 TTPALQ9BTX7 342 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 ROPN1BQ9BZX4 212 aaPredicted RBP22.77■■□□□ 1.24
PTPN13-205ENST00000502971 ROPN1Q9HAT0 212 aaPredicted RBP22.77■■□□□ 1.24
PTPN13-205ENST00000502971 DNAJC17Q9NVM6 304 aaKnown RBP22.77■■□□□ 1.24
PTPN13-205ENST00000502971 NINJ2Q9NZG7 142 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 DTLQ9NZJ0 730 aa22.77■■□□□ 1.24
PTPN13-205ENST00000502971 NT5C1B-RDH14C9J2C7 533 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 CREB3O43889 395 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 DGKIO75912 1065 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 MAGEA4P43358 317 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 GPR17Q13304 367 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 EIF4EBP2Q13542 120 aaPredicted RBP22.77■■□□□ 1.23
PTPN13-205ENST00000502971 CENPUQ71F23 418 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 ARHGAP18Q8N392 663 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 OLFM3Q96PB7 478 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 CENPHQ9H3R5 247 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 ANLNQ9NQW6 1124 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 ETNK2Q9NVF9 386 aa22.77■■□□□ 1.23
PTPN13-205ENST00000502971 TIMP1P01033 207 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 ALDH7A1P49419 539 aaKnown RBP22.76■■□□□ 1.23
PTPN13-205ENST00000502971 IFRD2Q12894 506 aaPredicted RBP22.76■■□□□ 1.23
PTPN13-205ENST00000502971 PAFAH1B3Q15102 231 aaKnown RBP22.76■■□□□ 1.23
PTPN13-205ENST00000502971 KYNUQ16719 465 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 DDR2Q16832 855 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 RTP2Q5QGT7 225 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 C6orf118Q5T5N4 469 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 EMC10Q5UCC4 262 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 B4GALNT4Q76KP1 1039 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 SCD5Q86SK9 330 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 MON1AQ86VX9 555 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 B3GALT6Q96L58 329 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 TTC25Q96NG3 672 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 PGLYRP2Q96PD5 576 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 TKTL2Q9H0I9 626 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 SMOC2Q9H3U7 446 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 IL37Q9NZH6 218 aa22.76■■□□□ 1.23
PTPN13-205ENST00000502971 EIF3HO15372 352 aaKnown RBP eCLIP22.75■■□□□ 1.23
PTPN13-205ENST00000502971 ZNF189O75820 626 aaPredicted RBP22.75■■□□□ 1.23
PTPN13-205ENST00000502971 UPP2O95045 317 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 ACSL3O95573 720 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 CPB1P15086 417 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms