RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CCDC195A0A1B0GUA6 201 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 FAM237BA0A1B0GVD1 139 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 PIRO00625 290 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 CYB561D2O14569 222 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 DNAJC6O75061 913 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 TOP3BO95985 862 aaKnown RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 GSTA2P09210 222 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 MYL2P10916 166 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 ZFXP17010 805 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 TKTP29401 623 aaKnown RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 NR2C2P49116 596 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 SEMA5AQ13591 1074 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 DGKDQ16760 1214 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 MROH9Q5TGP6 573 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 FAM131BQ86XD5 332 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 UNC5BQ8IZJ1 945 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 KCNV2Q8TDN2 545 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 GTF3C2Q8WUA4 911 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 OXNAD1Q96HP4 312 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 MAML3Q96JK9 1138 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 OLFM3Q96PB7 478 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 TRIM6Q9C030 488 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 DENND2DQ9H6A0 471 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 RNPEPL1Q9HAU8 725 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 MKS1Q9NXB0 559 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 MTO1Q9Y2Z2 717 aaKnown RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 PCDHA11Q9Y5I1 949 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 TSC2P49815 1807 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 KPNA7A9QM74 516 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 MFSD11O43934 449 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ENTPD5O75356 428 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 DGKIO75912 1065 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 KRT38O76015 456 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 GNL1P36915 607 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SCNN1AP37088 669 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 PITX1P78337 314 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SOX4Q06945 474 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 BST1Q10588 318 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ANKRD20A2Q5SQ80 823 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ANKRD20A1Q5TYW2 823 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ANKRD20A3Q5VUR7 823 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 OTUD1Q5VV17 481 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 RFWD3Q6PCD5 774 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 C4orf22Q6V702 233 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ARCQ7LC44 396 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 DPP9Q86TI2 863 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 CRYBG2Q8N1P7 616 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 TTC8Q8TAM2 541 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 TMEM40Q8WWA1 233 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 HTR3CQ8WXA8 447 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 RSRC1Q96IZ7 334 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 LGMNQ99538 433 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 CADM1Q9BY67 442 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ZNF395Q9H8N7 513 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 TMPRSS4Q9NRS4 437 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 GEMIN8Q9NWZ8 242 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SLC17A6Q9P2U8 582 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 UBQLN1Q9UMX0 589 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ZNF236Q9UL36 1845 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SMIM28A0A1B0GU29 152 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 BTBD19C9JJ37 291 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 HNRNPCL1O60812 293 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SMIM10L2AP0DMW4 78 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SMIM10L2BP0DMW5 78 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 DARSP14868 501 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 GNAZP19086 355 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 EPHX2P34913 555 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 CRADDP78560 199 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ZBTB16Q05516 673 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 HIC1Q14526 733 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 HSF5Q4G112 596 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 TEX44Q53QW1 395 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 LGSNQ5TDP6 509 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 USP50Q70EL3 339 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 APBB1IPQ7Z5R6 666 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 GPR142Q7Z601 462 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 DEPDC1BQ8WUY9 529 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 TFB1MQ8WVM0 346 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 MTBPQ96DY7 904 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SLC10A4Q96EP9 437 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 CEP41Q9BYV8 373 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 NMUR2Q9GZQ4 415 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 XAB2Q9HCS7 855 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 PIH1D1Q9NWS0 290 aaKnown RBP10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SLC5A4Q9NY91 659 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 SIRPGQ9P1W8 387 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 FZD10Q9ULW2 581 aa10.18□□□□□ -0.78
CLIP1-204ENST00000501271 A0A0A0MRY4 1105 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 WDR27A2RRH5 827 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 FCHO1O14526 889 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 STRNO43815 780 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 CCDC22O60826 627 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 TPBGLP0DKB5 382 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 ATXN8OSP0DMR3 200 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 CALB2P22676 271 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 MATKP42679 507 aa10.17□□□□□ -0.78
CLIP1-204ENST00000501271 SULT1E1P49888 294 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms