RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ADGRE2Q9UHX3 823 aa6.37□□□□□ -1.39
TMEM39A-212ENST00000497993 TUBE1Q9UJT0 475 aa6.37□□□□□ -1.39
TMEM39A-212ENST00000497993 LIMCH1Q9UPQ0 1083 aa6.37□□□□□ -1.39
TMEM39A-212ENST00000497993 A0A087X0M5 115 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 NPHP3-ACAD11A0A0J9YXS1 232 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 A0A1B0GX30 115 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 SYNDIG1LA6NDD5 238 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 PABPN1LA6NDY0 278 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ISM1B1AKI9 464 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 SLC16A6O15403 523 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 HOXC11O43248 304 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 MMP1P03956 469 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 RNASE1P07998 156 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 HARSP12081 509 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 XPAP23025 273 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 STAT5BP51692 787 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ITGA8P53708 1063 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 CCL23P55773 120 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 PCBP3P57721 371 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 NLRP5P59047 1200 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 WDR5P61964 334 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 RAB1AP62820 205 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 HMGN5P82970 282 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 HTRA4P83105 476 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ZNF200P98182 395 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 EGR3Q06889 387 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 GALNT1Q10472 559 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 DUSP4Q13115 394 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 PLCB4Q15147 1175 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 TARBP2Q15633 366 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 CFAP58Q5T655 872 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ARHGAP36Q6ZRI8 547 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 NEK8Q86SG6 692 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 DEFB123Q8N688 67 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 TBCKQ8TEA7 893 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 UCMAQ8WVF2 138 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ATRIPQ8WXE1 791 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 RGMAQ96B86 450 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 PGBD1Q96JS3 809 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 FAM20AQ96MK3 541 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ZMAT2Q96NC0 199 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 FCRL3Q96P31 734 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ALPK1Q96QP1 1244 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ZNF577Q9BSK1 485 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 SORBS1Q9BX66 1292 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 CCDC68Q9H2F9 335 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 AZI2Q9H6S1 392 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 CNTD2Q9H8S5 307 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 MBNL3Q9NUK0 354 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ORC3Q9UBD5 711 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 GPR34Q9UPC5 381 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 PCDHA10Q9Y5I2 948 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 B3GALT1Q9Y5Z6 326 aa6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 CFAP20Q9Y6A4 193 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-212ENST00000497993 ANK1P16157 1881 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 IGKV6-21A0A0C4DH24 114 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 A0A1W2PPC4 97 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 SSU72P8A0A1W2PR75 194 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 RSPH10B2B2RC85 870 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 SYT5O00445 386 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 ACKR2O00590 384 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 HNRNPDLO14979 420 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 HTRA2O43464 458 aaPredicted RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 JAK2O60674 1132 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 SOAT2O75908 522 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 STBD1O95210 358 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 LYPLA2O95372 231 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 GJB5O95377 273 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 C22orf31O95567 290 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 CHRNA1P02708 482 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 FTLP02792 175 aaPredicted RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 RSPH10BP0C881 870 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 INSRRP14616 1297 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 IFNGR1P15260 489 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 ENDOUP21128 410 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 EEF1GP26641 437 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 UBA7P41226 1012 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 MCM2P49736 904 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 IRAK1P51617 712 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 DCAF7P61962 342 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 FGL2Q14314 439 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 SPARCL1Q14515 664 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 FIGNQ5HY92 759 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 EARS2Q5JPH6 523 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 ZNF484Q5JVG2 852 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 XP32Q5T750 250 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 FAM160B1Q5W0V3 765 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 MIS18BP1Q6P0N0 1132 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 KLHDC10Q6PID8 442 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 CRTC3Q6UUV7 619 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 NOSTRINQ8IVI9 506 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 NDUFAF2Q8N183 169 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 OXR1Q8N573 874 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 RNF152Q8N8N0 203 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 RIN2Q8WYP3 895 aaPredicted RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 RSPH1Q8WYR4 309 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 HAS1Q92839 578 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 HDAC10Q969S8 669 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 MUL1Q969V5 352 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 PYM1Q9BRP8 204 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms