RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 NR1H3Q13133 447 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 FZD5Q13467 585 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 DHCR24Q15392 516 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 RHBDF2Q6PJF5 856 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 OLFML1Q6UWY5 402 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 LIAT1Q6ZQX7 453 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 FMNL3Q8IVF7 1028 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 FAM149B1Q96BN6 582 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 PLD4Q96BZ4 506 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 KCNH6Q9H252 994 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 SYNCQ9H7C4 482 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 SLC12A8A0AV02 714 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 TRDMT1O14717 391 aaKnown RBP11.73□□□□□ -0.53
ERCC8-208ENST00000497892 NCAM2O15394 837 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 HOXC11O43248 304 aaPredicted RBP11.73□□□□□ -0.53
ERCC8-208ENST00000497892 MSI1O43347 362 aaKnown RBP11.73□□□□□ -0.53
ERCC8-208ENST00000497892 HSF2BPO75031 334 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 IGLV3-27P01718 113 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 GLI1P08151 1106 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 CHRNB1P11230 501 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 ADH5P11766 374 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 NCAM1P13591 858 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 FERP16591 822 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 CORO1AP31146 461 aaKnown RBP11.73□□□□□ -0.53
ERCC8-208ENST00000497892 UBASH3AP57075 661 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 FMO1Q01740 532 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 CCINQ13939 588 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 LRRC32Q14392 662 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 PON2Q15165 354 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 TRIP4Q15650 581 aaPredicted RBP11.73□□□□□ -0.53
ERCC8-208ENST00000497892 FIGNQ5HY92 759 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 TMEM196Q5HYL7 178 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 LY6G5CQ5SRR4 150 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 NAIF1Q69YI7 327 aaPredicted RBP11.73□□□□□ -0.53
ERCC8-208ENST00000497892 TRIM72Q6ZMU5 477 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 TOGARAM2Q6ZUX3 1019 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 FAM183BPQ6ZVS7 135 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 ZDHHC17Q8IUH5 632 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 DTWD2Q8NBA8 298 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 DQX1Q8TE96 717 aaKnown RBP11.73□□□□□ -0.53
ERCC8-208ENST00000497892 EXOC4Q96A65 974 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 SPSB2Q99619 263 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 PRRX2Q99811 253 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 P2RY13Q9BPV8 354 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 IER2Q9BTL4 223 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 EDEM3Q9BZQ6 932 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 DCLK3Q9C098 648 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 POPDC2Q9HBU9 364 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 SPHK2Q9NRA0 654 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 ASNSD1Q9NWL6 643 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 SFMBT1Q9UHJ3 866 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 NAALADL1Q9UQQ1 740 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 ZNF510Q9Y2H8 683 aa11.73□□□□□ -0.53
ERCC8-208ENST00000497892 LRRC53A6NM62 1247 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 CAPN9O14815 690 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 CYP1A1P04798 512 aaPredicted RBP11.72□□□□□ -0.53
ERCC8-208ENST00000497892 HMBSP08397 361 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 CCDC172P0C7W6 258 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 SCNN1AP37088 669 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 OPRD1P41143 372 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 EIF2DP41214 584 aaKnown RBP11.72□□□□□ -0.53
ERCC8-208ENST00000497892 GABRB2P47870 512 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 ARID5AQ03989 594 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 RING1Q06587 406 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 NNTQ13423 1086 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 TAF5Q15542 800 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 EFHC1Q5JVL4 640 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 SYPL2Q5VXT5 272 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 NAA35Q5VZE5 725 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 FSTL4Q6MZW2 842 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 SLC26A9Q7LBE3 791 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 TMEM25Q86YD3 366 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 DENND1CQ8IV53 801 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 FAM217AQ8IXS0 508 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 MSANTD4Q8NCY6 345 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 RNF214Q8ND24 703 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 PRSS33Q8NF86 280 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 ZNF397Q8NF99 534 aaPredicted RBP11.72□□□□□ -0.53
ERCC8-208ENST00000497892 CD101Q93033 1021 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 SERPINB11Q96P15 392 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 SLC2A13Q96QE2 648 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 CHRDQ9H2X0 955 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 FBRSL1Q9HCM7 1045 aaKnown RBP11.72□□□□□ -0.53
ERCC8-208ENST00000497892 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
ERCC8-208ENST00000497892 AGO1Q9UL18 857 aaKnown RBP11.72□□□□□ -0.53
ERCC8-208ENST00000497892 CACNA1IQ9P0X4 2223 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 A0A1W2PQJ5 194 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 DAB1O75553 588 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 LATS1O95835 1130 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 IGLV3-25P01717 112 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 TPM3P06753 285 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 DRD1P21728 446 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 MMP8P22894 467 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 HARS2P49590 506 aaKnown RBP11.71□□□□□ -0.53
ERCC8-208ENST00000497892 GALK1P51570 392 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 SLC6A3Q01959 620 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 CENPCQ03188 943 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms