RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 ETV4P43268 484 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CD97P48960 835 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 OSTNP61366 133 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 GPSM2P81274 684 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 AOC3Q16853 763 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 C1orf220Q5T0J3 134 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 TMEM198Q66K66 360 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 LRRC8EQ6NSJ5 796 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZNF276Q8N554 614 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZNF668Q96K58 619 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CEP41Q9BYV8 373 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 COQ10BQ9H8M1 238 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 FZD1Q9UP38 647 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 PLSCR1O15162 318 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CBFA2T3O75081 653 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 KCNH1O95259 989 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 RCVRNP35243 200 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 GTF2A2P52657 109 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 TPD52P55327 224 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 SULT2A1Q06520 285 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 SNAPC2Q13487 334 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 DPYSL3Q14195 570 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CES4AQ5XG92 561 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 POTEAQ6S8J7 498 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZBTB49Q6ZSB9 765 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CENPSQ8N2Z9 138 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 PARP8Q8N3A8 854 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 MBOAT7Q96N66 472 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 PCDHAC1Q9H158 963 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 NGRNQ9NPE2 291 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 ARL1P40616 181 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 YAP1P46937 504 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 SLC18A1P54219 525 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 GSTM4Q03013 218 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 RALGDSQ12967 914 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 DLGAP5Q15398 846 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CYP2A13Q16696 494 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 KYAT3Q6YP21 454 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 HOMEZQ8IX15 550 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 KIAA2013Q8IYS2 634 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 TMCO5AQ8N6Q1 288 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 NPAS2Q99743 824 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 POLR1BQ9H9Y6 1135 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 PPCSQ9HAB8 311 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 TRPC7Q9HCX4 862 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 TUFT1Q9NNX1 390 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 PCDH12Q9NPG4 1184 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 GID8Q9NWU2 228 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 SNCAIPQ9Y6H5 919 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 UBE4BO95155 1302 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 SCN11AQ9UI33 1791 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 SH3PXD2BA1X283 911 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 FAM149AA5PLN7 773 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 OXSR1O95747 527 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 RALBP11234 206 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 CPOXP36551 454 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 SREBF1P36956 1147 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 GLRBP48167 497 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 NDST2P52849 883 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 PPP4CP60510 307 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 KLF10Q13118 480 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 HNRNPDQ14103 355 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 GPAT2Q6NUI2 795 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 CMC1Q7Z7K0 106 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 IFNEQ86WN2 208 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 HEATR4Q86WZ0 1026 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 SNX29P2Q8IUI4 249 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 OFCC1Q8IZS5 231 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 LRTOMTQ8WZ04 291 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 C12orf43Q96C57 262 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 C7orf26Q96N11 449 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 CEPT1Q9Y6K0 416 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 SF3B1O75533 1304 aaKnown RBP eCLIP10.93□□□□□ -0.665e-6■■■■■ 68.9
TRAPPC12-223ENST00000497597 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 FUOMA2VDF0 154 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 NDUFB10O96000 172 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 MAGP20916 626 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 KCNT2Q6UVM3 1135 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 PRR23BQ6ZRT6 265 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 ERI1Q8IV48 349 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 KYQ8NBH2 561 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 PDCD6IPQ8WUM4 868 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 DDX1Q92499 740 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 SGF29Q96ES7 293 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 WDR83Q9BRX9 315 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 DNAJB4Q9UDY4 337 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 CTDP1Q9Y5B0 961 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 DGKBQ9Y6T7 804 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 MYPNQ86TC9 1320 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 CYP3A7-CYP3A51PA0A087WV96 503 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 LRRIQ4A6NIV6 560 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 SDR42E2A6NKP2 422 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 TBX3O15119 743 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 KRT3P12035 628 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 UNGP13051 313 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 IDH3AP50213 366 aa10.93□□□□□ -0.66
TRAPPC12-223ENST00000497597 ADGRE1Q14246 886 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms