RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZNF23P17027 643 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 UGT1A6P19224 532 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 UGT1A1P22309 533 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 UGT1A4P22310 534 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 UGT1A3P35503 534 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 UGT1A5P35504 534 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 SOX10P56693 466 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 SERPINI1Q99574 410 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 PIH1D1Q9NWS0 290 aaKnown RBP13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 ADA2Q9NZK5 511 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 SLC9A2Q9UBY0 812 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 MYRFQ9Y2G1 1151 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 PPME1Q9Y570 386 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 FBXO21O94952 628 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 AMHP03971 560 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 CCDC130P13994 396 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 MX2P20592 715 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 CDKN2BP42772 138 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 OGDHQ02218 1023 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 GRAPQ13588 217 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 CATSPER1Q8NEC5 780 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 GRAPLQ8TC17 118 aaPredicted RBP13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 DRC3Q9H069 523 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 SLC38A7Q9NVC3 462 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 TMEM98Q9Y2Y6 226 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 FADS3Q9Y5Q0 445 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 RFPL1O75677 317 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 MCF2P10911 925 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 PSMA2P25787 234 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 PPARGP37231 505 aaPredicted RBP13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 NOMO3P69849 1222 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 PFKPQ01813 784 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 DPYSL3Q14195 570 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 CYP2A13Q16696 494 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 LDLRAP1Q5SW96 308 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 MOXD1Q6UVY6 613 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 TRIM72Q6ZMU5 477 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 DCDC5Q6ZRR9 648 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 FAM47BQ8NA70 645 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 MOCOSQ96EN8 888 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 COQ10BQ9H8M1 238 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 TMED5Q9Y3A6 229 aa13.47□□□□□ -0.25
GAPVD1-220ENST00000497580 TESPA1A2RU30 521 aaPredicted RBP13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 ZBTB14O43829 449 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 FOSP01100 380 aaPredicted RBP13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 GPC3P51654 580 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 GNA12Q03113 381 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 NR1D2Q14995 579 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 SH2D5Q6ZV89 423 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 ATP6V1E2Q96A05 226 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 ISOC1Q96CN7 298 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 SMYD2Q9NRG4 433 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 C20orf96Q9NUD7 363 aaPredicted RBP13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 RNF11Q9Y3C5 154 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 C1orf232A0A0U1RR37 186 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 HNRNPDLO14979 420 aaKnown RBP13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 MS4A2Q01362 244 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 KLF10Q13118 480 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 ADRM1Q16186 407 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 TEDDM1Q5T9Z0 273 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 MAVSQ7Z434 540 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 C10orf107Q8IVU9 208 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 KCTD6Q8NC69 237 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 SLC35B2Q8TB61 432 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 MKL1Q969V6 931 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 CIB1Q99828 191 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 FERMT1Q9BQL6 677 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 TBC1D22BQ9NU19 505 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 FETUBQ9UGM5 382 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 POLLQ9UGP5 575 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 NARFQ9UHQ1 456 aa13.46□□□□□ -0.25
GAPVD1-220ENST00000497580 A8MU76 341 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 BIRC5O15392 142 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 H6PDO95479 791 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 F7P08709 466 aaPredicted RBP13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 ART3Q13508 389 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 PLA2G4FQ68DD2 849 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 SLC9A4Q6AI14 798 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 UNC5BQ8IZJ1 945 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 TTLL6Q8N841 843 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 RCN3Q96D15 328 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 WDR55Q9H6Y2 383 aaPredicted RBP13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 SACM1LQ9NTJ5 587 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 VPS51Q9UID3 782 aa13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 GPC6Q9Y625 555 aaPredicted RBP13.46□□□□□ -0.26
GAPVD1-220ENST00000497580 HSPA4LO95757 839 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 NME3Q13232 169 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 TUBB3Q13509 450 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 EMC1Q8N766 993 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 ADCY4Q8NFM4 1077 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms