RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 GIPC1O14908 333 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 NPC1O15118 1278 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 VDRP11473 427 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 ENGP17813 658 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 CSRP1P21291 193 aaKnown RBP17.95■□□□□ 0.46
SMC4-226ENST00000497311 TBXAS1P24557 533 aaPredicted RBP17.95■□□□□ 0.46
SMC4-226ENST00000497311 ZNF33AQ06730 810 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 LRMPQ12912 555 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 ST3GAL2Q16842 350 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 DUOXA1Q1HG43 343 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 CPXM2Q8N436 756 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 UCMAQ8WVF2 138 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 MRGPRX1Q96LB2 322 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
SMC4-226ENST00000497311 STON1Q9Y6Q2 735 aa17.95■□□□□ 0.46
SMC4-226ENST00000497311 ASCC3Q8N3C0 2202 aaKnown RBP17.94■□□□□ 0.46
SMC4-226ENST00000497311 PSMA7O14818 248 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 CFIP05156 583 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 CEACAM1P13688 526 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 MAPK8P45983 427 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 FMO5P49326 533 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 ADIGQ0VDE8 80 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 STARD3Q14849 445 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 E2F5Q15329 346 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 GEN1Q17RS7 908 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 RABEPKQ7Z6M1 372 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 SIX6OS1Q8N1H7 587 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 UBA3Q8TBC4 463 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 DDI1Q8WTU0 396 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 RNF139Q8WU17 664 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 NDRG1Q92597 394 aaKnown RBP17.94■□□□□ 0.46
SMC4-226ENST00000497311 DHTKD1Q96HY7 919 aaPredicted RBP17.94■□□□□ 0.46
SMC4-226ENST00000497311 THAP10Q9P2Z0 257 aaPredicted RBP17.94■□□□□ 0.46
SMC4-226ENST00000497311 KIAA1257Q9ULG3 409 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 SLC6A14Q9UN76 642 aa17.94■□□□□ 0.46
SMC4-226ENST00000497311 O00370 1275 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 NDUFS2O75306 463 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 SERPINF2P08697 491 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 SETSIPP0DME0 302 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 PPP1R2P41236 205 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 HARS2P49590 506 aaKnown RBP17.93■□□□□ 0.46
SMC4-226ENST00000497311 ZNF132P52740 706 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 ATXN3P54252 364 aaPredicted RBP17.93■□□□□ 0.46
SMC4-226ENST00000497311 GFPT1Q06210 699 aaPredicted RBP17.93■□□□□ 0.46
SMC4-226ENST00000497311 ZNF252P-AS1Q0IIN9 211 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 TRIP4Q15650 581 aaPredicted RBP17.93■□□□□ 0.46
SMC4-226ENST00000497311 ISM2Q6H9L7 571 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 KIAA1324Q6UXG2 1013 aaKnown RBP17.93■□□□□ 0.46
SMC4-226ENST00000497311 BHLHA9Q7RTU4 235 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 ANKS1BQ7Z6G8 1248 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 FMNL3Q8IVF7 1028 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 FAM217AQ8IXS0 508 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 UBR7Q8N806 425 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 KCTD13Q8WZ19 329 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 PIWIL1Q96J94 861 aaKnown RBP17.93■□□□□ 0.46
SMC4-226ENST00000497311 CEP63Q96MT8 703 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 SLC6A17Q9H1V8 727 aa17.93■□□□□ 0.46
SMC4-226ENST00000497311 HBS1LQ9Y450 684 aaKnown RBP17.93■□□□□ 0.46
SMC4-226ENST00000497311 PAEPP09466 180 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 IL12RB1P42701 662 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 EIF4HQ15056 248 aaKnown RBP17.92■□□□□ 0.46
SMC4-226ENST00000497311 FUT11Q495W5 492 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 CCDC40Q4G0X9 1142 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 MPPE1Q53F39 396 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 BSPRYQ5W0U4 402 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 TMEM270Q6UE05 265 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 SLC41A1Q8IVJ1 513 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 ELOA2Q8IYF1 753 aaPredicted RBP17.92■□□□□ 0.46
SMC4-226ENST00000497311 TRIML1Q8N9V2 468 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 EDEM1Q92611 657 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 HSPA12BQ96MM6 686 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 NT5C1BQ96P26 610 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 SLC32A1Q9H598 525 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 PRDM16Q9HAZ2 1276 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 CD93Q9NPY3 652 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 CNGB3Q9NQW8 809 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 ABCC13Q9NSE7 274 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 ELOVL2Q9NXB9 296 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 SFMBT1Q9UHJ3 866 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 CLEC4EQ9ULY5 219 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 PCDHB4Q9Y5E5 795 aa17.92■□□□□ 0.46
SMC4-226ENST00000497311 KMT2BQ9UMN6 2715 aaPredicted RBP17.91■□□□□ 0.46
SMC4-226ENST00000497311 YJEFN3A6XGL0 299 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 E7ENQ6 273 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 PMM2O15305 246 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
SMC4-226ENST00000497311 KRT37O76014 449 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 LCP1P13796 627 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 CETN1Q12798 172 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 ENPP2Q13822 863 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 PKDCCQ504Y2 493 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 LCLAT1Q6UWP7 414 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 METTL3Q86U44 580 aaKnown RBP17.91■□□□□ 0.46
SMC4-226ENST00000497311 RGL4Q8IZJ4 473 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 SCML4Q8N228 414 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 DEFB124Q8NES8 71 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 FOXJ1Q92949 421 aa17.91■□□□□ 0.46
SMC4-226ENST00000497311 ZNF419Q96HQ0 510 aaPredicted RBP17.91■□□□□ 0.46
SMC4-226ENST00000497311 GTPBP2Q9BX10 602 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms