RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 C6orf52Q5T4I8 152 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SLC9A9Q8IVB4 645 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TPH2Q8IWU9 490 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 RHOT1Q8IXI2 618 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 COLGALT2Q8IYK4 626 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 FAM71AQ8IYT1 594 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 DEFB107AQ8IZN7 70 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SLC7A5P1Q8MH63 180 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SLC10A4Q96EP9 437 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 PCDH9Q9HC56 1237 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.35□□□□□ -0.91
HPS4-217ENST00000496385 PCDHGB4Q9UN71 923 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 PLLPQ9Y342 182 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 PCDHGB5Q9Y5G0 923 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SNCAIPQ9Y6H5 919 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 A0A0B4J269 797 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 PRSS51A0A1B0GVH4 220 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 KRBA1A5PL33 1030 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 ANKRD34BA5PLL1 514 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 AREL1O15033 823 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TPPPO94811 219 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 GH2P01242 217 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 APOEP02649 317 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 AKR1B1P15121 316 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 ARSEP51690 589 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 CBLBQ13191 982 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TUBB3Q13509 450 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TFDP1Q14186 410 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TRIM71Q2Q1W2 868 aaKnown RBP9.34□□□□□ -0.91
HPS4-217ENST00000496385 DEFB115Q30KQ5 88 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 CBWD6Q4V339 395 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 CBWD3Q5JTY5 395 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 CBWD5Q5RIA9 395 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 LGSNQ5TDP6 509 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 AGAP7PQ5VUJ5 663 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 ACAD10Q6JQN1 1059 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 LINC00299Q6ZSB3 139 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 STXBP4Q6ZWJ1 553 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TTC30AQ86WT1 665 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 MCF2L2Q86YR7 1114 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 HPS6Q86YV9 775 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 SLC44A1Q8WWI5 657 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 NACC2Q96BF6 587 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 ARMC7Q9H6L4 198 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 UBE2TQ9NPD8 197 aaPredicted RBP9.34□□□□□ -0.91
HPS4-217ENST00000496385 RIC8BQ9NVN3 520 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 RNF11Q9Y3C5 154 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 HEMK1Q9Y5R4 338 aaPredicted RBP9.34□□□□□ -0.91
HPS4-217ENST00000496385 CSADQ9Y600 493 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 ARHGEF37A1IGU5 675 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TRIM64A6NGJ6 449 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 MEI4A8MW99 385 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TTC34A8MYJ7 566 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 RPA1P27694 616 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 GJA5P36382 358 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 YWHAGP61981 247 aaKnown RBP eCLIP9.34□□□□□ -0.91
HPS4-217ENST00000496385 GABPAQ06546 454 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 GPS1Q13098 491 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 PTK7Q13308 1070 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 ATP1A4Q13733 1029 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
HPS4-217ENST00000496385 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
HPS4-217ENST00000496385 LSM12Q3MHD2 195 aaKnown RBP9.34□□□□□ -0.91
HPS4-217ENST00000496385 FSCBQ5H9T9 825 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 PAOXQ6QHF9 649 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 NUDCD3Q8IVD9 361 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 SLFN12Q8IYM2 578 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 OR7G1Q8NGA0 311 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 CALML6Q8TD86 181 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 HSPH1Q92598 858 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TAMM41Q96BW9 452 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TMEM47Q9BQJ4 181 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 REEP2Q9BRK0 252 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 HERPUD2Q9BSE4 406 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 RIOX1Q9H6W3 641 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 OLAHQ9NV23 265 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 DNAJC28Q9NX36 388 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
HPS4-217ENST00000496385 PAPPA2Q9BXP8 1791 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 POTEB3A0JP26 581 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 GOLGA8RI6L899 631 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 CLIC2O15247 247 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 GCNT3O95395 438 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 KRT75O95678 551 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 P4HA1P13674 534 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 ENDOUP21128 410 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 GLRA2P23416 452 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 NMT1P30419 496 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 VEGFBP49765 207 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 BMXP51813 675 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 NDST2P52849 883 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 CDKL1Q00532 357 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 CACNB1Q02641 598 aaPredicted RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 GRSF1Q12849 480 aaKnown RBP eCLIP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms