RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 LTFP02788 710 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 CYBBP04839 570 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 FYNP06241 537 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 GBP1P32455 592 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 USP8P40818 1118 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 ELF2Q15723 593 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 PRR23CQ6ZRP0 262 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 FAM217AQ8IXS0 508 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 PGBD3Q8N328 593 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 FRMD1Q8N878 549 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 DDI1Q8WTU0 396 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 HMGB4Q8WW32 186 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 TMA16Q96EY4 203 aaKnown RBP16.29■□□□□ 0.2
LIMS2-216ENST00000494613 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
LIMS2-216ENST00000494613 DCHS1Q96JQ0 3298 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-216ENST00000494613 A0A1W2PQF6 199 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 TCRBV21S2A2A0A5A6 115 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 MSI1O43347 362 aaKnown RBP16.28■□□□□ 0.2
LIMS2-216ENST00000494613 THAP12O43422 761 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 ACADSBP45954 432 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 FOXK2Q01167 660 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 SF3A2Q15428 464 aaKnown RBP16.28■□□□□ 0.2
LIMS2-216ENST00000494613 PLA2G2CQ5R387 149 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 ADGRF1Q5T601 910 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 MSANTD2Q6P1R3 559 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 DGLUCYQ7Z3D6 616 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 TMEM110Q86TL2 294 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 CHPFQ8IZ52 775 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 PIWIL1Q96J94 861 aaKnown RBP16.28■□□□□ 0.2
LIMS2-216ENST00000494613 TUBGCP2Q9BSJ2 902 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 SLC2A11Q9BYW1 496 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 NDST4Q9H3R1 872 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 BCCIPQ9P287 314 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIMS2-216ENST00000494613 APEX2Q9UBZ4 518 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 CYTH4Q9UIA0 394 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 STOML2Q9UJZ1 356 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 PCDHGA5Q9Y5G8 931 aa16.28■□□□□ 0.2
LIMS2-216ENST00000494613 ABCA7Q8IZY2 2146 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 FOXN3O00409 490 aaPredicted RBP16.27■□□□□ 0.2
LIMS2-216ENST00000494613 MAP3K13O43283 966 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 NCAM1P13591 858 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 HOXB2P14652 356 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 GABRG2P18507 467 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 BCKDHBP21953 392 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 GNA15P30679 374 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 P2RY2P41231 377 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 MAN2A1Q16706 1144 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 GEN1Q17RS7 908 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 VWA3BQ502W6 1294 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 MPPE1Q53F39 396 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 HSP90AA4PQ58FG1 418 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
LIMS2-216ENST00000494613 DPY19L2P1Q6NXN4 242 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 C11orf74Q86VG3 221 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 FAM114A1Q8IWE2 563 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 UNC45BQ8IWX7 931 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 WDTC1Q8N5D0 677 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 GOLGA1Q92805 767 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 ERLEC1Q96DZ1 483 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 SMOC1Q9H4F8 434 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 CD248Q9HCU0 757 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 SIX2Q9NPC8 291 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 SAMSN1Q9NSI8 373 aaKnown RBP16.27■□□□□ 0.2
LIMS2-216ENST00000494613 CACNA2D2Q9NY47 1150 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 DACH1Q9UI36 760 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 DNAJC12Q9UKB3 198 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 CDV3Q9UKY7 258 aaKnown RBP16.27■□□□□ 0.2
LIMS2-216ENST00000494613 NAALADL1Q9UQQ1 740 aa16.27■□□□□ 0.2
LIMS2-216ENST00000494613 EML5Q05BV3 1969 aa16.27■□□□□ 0.19
LIMS2-216ENST00000494613 GOLGA6L7A0A1B0GV03 622 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 BCLAF3A2AJT9 711 aaKnown RBP16.26■□□□□ 0.19
LIMS2-216ENST00000494613 GFRA2O00451 464 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 TIMM44O43615 452 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 FOXD2O60548 495 aaPredicted RBP16.26■□□□□ 0.19
LIMS2-216ENST00000494613 CAVIN2O95810 425 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 TBX4P57082 545 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 CREB5Q02930 508 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 KCNMA1Q12791 1236 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 BYSLQ13895 437 aaKnown RBP16.26■□□□□ 0.19
LIMS2-216ENST00000494613 MEA1Q16626 185 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 MAP7D1Q3KQU3 841 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 MIIPQ5JXC2 388 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 SYPL2Q5VXT5 272 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 PMS2CLQ68D20 193 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 KIAA1211LQ6NV74 962 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 IPO4Q8TEX9 1081 aaKnown RBP16.26■□□□□ 0.19
LIMS2-216ENST00000494613 SHC3Q92529 594 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 AZIN2Q96A70 460 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 GABRG3Q99928 467 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 RXFP3Q9NSD7 469 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 ELOVL2Q9NXB9 296 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 MBD1Q9UIS9 605 aaPredicted RBP16.26■□□□□ 0.19
LIMS2-216ENST00000494613 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
LIMS2-216ENST00000494613 KIAA1549LQ6ZVL6 1849 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 RALGAPA1Q6GYQ0 2036 aa16.26■□□□□ 0.19
LIMS2-216ENST00000494613 DCDC2BA2VCK2 349 aa16.25■□□□□ 0.19
LIMS2-216ENST00000494613 ZBTB24O43167 697 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms