RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 RSRC2Q7L4I2 434 aaKnown RBP13.18□□□□□ -0.3
HSPG2-212ENST00000493940 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-212ENST00000493940 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 ZNF513Q8N8E2 541 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-212ENST00000493940 TSTD1Q8NFU3 115 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 EXOC4Q96A65 974 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 DNAI2Q9GZS0 605 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 NUP62CLQ9H1M0 184 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 CNGB3Q9NQW8 809 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 GMEB2Q9UKD1 530 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 RAB23Q9ULC3 237 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 USP18Q9UMW8 372 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 RAD54BQ9Y620 910 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 KNL1Q8NG31 2342 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 FAM170AA1A519 330 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 PAPSS1O43252 624 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 IGLV3-27P01718 113 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 LTFP02788 710 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 GABRG2P18507 467 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 SLC6A4P31645 630 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 MTIF2P46199 727 aaKnown RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 DGKGP49619 791 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 MFAP3P55082 362 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 SLC8A3P57103 927 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 CETN1Q12798 172 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 PLA2G2CQ5R387 149 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 TCEAL6Q6IPX3 200 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 GBP6Q6ZN66 633 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 SIX6OS1Q8N1H7 587 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 CPXM2Q8N436 756 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 WFDC5Q8TCV5 224 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 SORCS1Q8WY21 1168 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 SHC3Q92529 594 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 TCEAL3Q969E4 200 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 HSFY1Q96LI6 401 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 IPO9Q96P70 1041 aaKnown RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 RTKNQ9BST9 563 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 THAP9Q9H5L6 903 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 ABCC13Q9NSE7 274 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 APEX2Q9UBZ4 518 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
HSPG2-212ENST00000493940 NAALADL1Q9UQQ1 740 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 DOCK4Q8N1I0 1966 aa13.17□□□□□ -0.3
HSPG2-212ENST00000493940 TCRBV21S2A2A0A5A6 115 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 THAP12O43422 761 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 KRT37O76014 449 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 EPN2O95208 641 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 GNA15P30679 374 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 GOLGA8FQ08AF8 430 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 GOLGA8DPQ0D2H9 430 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 CSRP2Q16527 193 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 EXOC3L4Q17RC7 722 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 FAM133BQ5BKY9 247 aaKnown RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 NADSYN1Q6IA69 706 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 RFWD3Q6PCD5 774 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 PRR23CQ6ZRP0 262 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 TADA2BQ86TJ2 420 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 ADAM32Q8TC27 787 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 HMGB4Q8WW32 186 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 PLD4Q96BZ4 506 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 XPO6Q96QU8 1125 aaKnown RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 CDK5RAP1Q96SZ6 601 aaKnown RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 DCLK3Q9C098 648 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 NDST4Q9H3R1 872 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 CACNA2D2Q9NY47 1150 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 XPO7Q9UIA9 1087 aaKnown RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 STOML2Q9UJZ1 356 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 DNAJC12Q9UKB3 198 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 STRIP2Q9ULQ0 834 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 HBS1LQ9Y450 684 aaKnown RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
HSPG2-212ENST00000493940 KMT2BQ9UMN6 2715 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-212ENST00000493940 CACNA1EQ15878 2313 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 DCDC2BA2VCK2 349 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 GTPBP10A4D1E9 387 aaKnown RBP13.15□□□□□ -0.3
HSPG2-212ENST00000493940 E5RJQ4 531 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-212ENST00000493940 NTSR1P30989 418 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 CHKAP35790 457 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 P2RY2P41231 377 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 STILQ15468 1287 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 MAN2A1Q16706 1144 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 EOGTQ5NDL2 527 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 TMEM110Q86TL2 294 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 SLC47A2Q86VL8 602 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 PASD1Q8IV76 773 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 IRGQQ8WZA9 623 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms