RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, human

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF3A-208	ENST00000493903	HEXIM1	O94992	359 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	LMNA	P02545	664 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	WEE2	P0C1S8	567 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	CHN1	P15882	459 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	TM4SF1	P30408	202 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	BSG	P35613	385 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	GGT5	P36269	586 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	RPS19	P39019	145 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	PSMB10	P40306	273 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	PCP4	P48539	62 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	NDUFV1	P49821	464 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	RPS3A	P61247	264 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	MTAP	Q13126	283 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	THOC5	Q13769	683 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	AAK1	Q2M2I8	961 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	P3H1	Q32P28	736 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	ZNF385B	Q569K4	471 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	FAM90A2P	Q658T7	463 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	CLNK	Q7Z7G1	428 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	KBTBD2	Q8IY47	623 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	ULK2	Q8IYT8	1036 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	CARF	Q8N187	725 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	SYNE4	Q8N205	404 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	FAM109A	Q8N4B1	249 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	NSUN7	Q8NE18	718 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	MDGA1	Q8NFP4	955 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	ADAMTS17	Q8TE56	1095 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	SSH3	Q8TE77	659 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	ZNF483	Q8TF39	744 aa	Predicted RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	TMEM171	Q8WVE6	324 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	ATRIP	Q8WXE1	791 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	MCRS1	Q96EZ8	462 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	CALML4	Q96GE6	196 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	PHACTR3	Q96KR7	559 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	NR1H4	Q96RI1	486 aa	Predicted RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	CD180	Q99467	661 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	MPHOSPH9	Q99550	1183 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	RANBP17	Q9H2T7	1088 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	C12orf65	Q9H3J6	166 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	SEC61A2	Q9H9S3	476 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	FBXO28	Q9NVF7	368 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	HCFC1R1	Q9NWW0	138 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	VSX1	Q9NZR4	365 aa	Predicted RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	HSFX1	Q9UBD0	423 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	RPS6KA6	Q9UK32	745 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	OAZ3	Q9UMX2	235 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	DRG1	Q9Y295	367 aa	Known RBP	4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903	SSX2IP	Q9Y2D8	614 aa		4.86	□□□□□ -1.63
GTF3A-208	ENST00000493903		A0A1W2PS29	197 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	SH2D7	A6NKC9	451 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	NKX2-8	O15522	239 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	TRIAP1	O43715	76 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	APOA4	P06727	396 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	CR2	P20023	1033 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	MMP8	P22894	467 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	PRKCH	P24723	683 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	CD6	P30203	668 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	THBS4	P35443	961 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	NLRP5	P59047	1200 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	IFI35	P80217	286 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	SEMA3B	Q13214	749 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	DYRK1A	Q13627	763 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	KCNJ12	Q14500	433 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	PLCB4	Q15147	1175 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	CDC37	Q16543	378 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	ST3GAL2	Q16842	350 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	HECTD3	Q5T447	861 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	METRNL	Q641Q3	311 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	NAA16	Q6N069	864 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	SYNE3	Q6ZMZ3	975 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	KRT27	Q7Z3Y8	459 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	SZRD1	Q7Z422	152 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	FAM124A	Q86V42	546 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	RAB11FIP4	Q86YS3	637 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	IZUMO1	Q8IYV9	350 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	TTC30B	Q8N4P2	665 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	TTC39C	Q8N584	583 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	RFWD2	Q8NHY2	731 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	KCNG4	Q8TDN1	519 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	OSCP1	Q8WVF1	389 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	MASTL	Q96GX5	879 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	SLC25A18	Q9H1K4	315 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	KCND2	Q9NZV8	630 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	MORF4L1	Q9UBU8	362 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	CD207	Q9UJ71	328 aa		4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	ZNF215	Q9UL58	517 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.85	□□□□□ -1.63
GTF3A-208	ENST00000493903	RPGRIP1L	Q68CZ1	1315 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903	TBC1D3D	A0A087WVF3	549 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903	TBC1D3I	A0A087WXS9	549 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903	TBC1D3E	A0A087X179	549 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903	TBC1D3K	A0A087X1G2	549 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903	PRAMEF33	A0A0G2JMD5	474 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903		A0A1B0GTW7	788 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903	TBC1D3B	A6NDS4	549 aa		4.84	□□□□□ -1.63
GTF3A-208	ENST00000493903	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.84	□□□□□ -1.63

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