RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 NXPE3Q969Y0 559 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 E2F7Q96AV8 911 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 PGAP3Q96FM1 320 aaPredicted RBP12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 ZFYVE19Q96K21 471 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 BTBD6Q96KE9 485 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 ANLNQ9NQW6 1124 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 RRN3Q9NYV6 651 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 COX16Q9P0S2 106 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 INTUQ9ULD6 942 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 STAP1Q9ULZ2 295 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 TLR6Q9Y2C9 796 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 WNT6Q9Y6F9 365 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 SCINQ9Y6U3 715 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 C5orf42Q9H799 3197 aa12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 TCF20Q9UGU0 1960 aaKnown RBP12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 NUP210Q8TEM1 1887 aaPredicted RBP12.61□□□□□ -0.39
RHBDF1-211ENST00000493647 E2F8A0AVK6 867 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 ARNTLO00327 626 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 SLC34A2O95436 690 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 ARSAP15289 507 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 PSMC3P17980 439 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 CORO1AP31146 461 aaKnown RBP12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 SDC4P31431 198 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 CXCR3P49682 368 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 HDAC4P56524 1084 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 RING1Q06587 406 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 SPA17Q15506 151 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 CDO1Q16878 200 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 TRIM68Q6AZZ1 485 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 CPNE8Q86YQ8 564 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 ZNF830Q96NB3 372 aaPredicted RBP12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 FAM83CQ9BQN1 747 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 CNPY3Q9BT09 278 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 LACRTQ9GZZ8 138 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 OSGEPQ9NPF4 335 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 HPS4Q9NQG7 708 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 TMPRSS4Q9NRS4 437 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 CTTNBP2NLQ9P2B4 639 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 XPO7Q9UIA9 1087 aaKnown RBP12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 SH3BP1Q9Y3L3 701 aa12.6□□□□□ -0.39
RHBDF1-211ENST00000493647 KCNU1A8MYU2 1149 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 CHADO15335 359 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 ARHGAP6O43182 974 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 MTA2O94776 668 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 PSMA2P25787 234 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 GDI1P31150 447 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 GBP1P32455 592 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 RDXP35241 583 aaKnown RBP12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 KPNA1P52294 538 aaPredicted RBP12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 DEUP1Q05D60 604 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 TNK2Q07912 1038 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 CCDC173Q0VFZ6 552 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 TCEAL1Q15170 157 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 EML3Q32P44 896 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 IER5LQ5T953 404 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 NADSYN1Q6IA69 706 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 FAM131BQ86XD5 332 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 DENND1CQ8IV53 801 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 SLC35G2Q8TBE7 412 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 ZNF564Q8TBZ8 553 aaPredicted RBP12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 FNIP1Q8TF40 1166 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 FAM172AQ8WUF8 416 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 RFFLQ8WZ73 363 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 UHRF1Q96T88 793 aaPredicted RBP12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 TRMT61BQ9BVS5 477 aaKnown RBP12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 MRPL47Q9HD33 250 aaKnown RBP12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 SALL4Q9UJQ4 1053 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
RHBDF1-211ENST00000493647 HELZP42694 1942 aaKnown RBP12.58□□□□□ -0.39
RHBDF1-211ENST00000493647 GOLGA6L7A0A1B0GV03 622 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 OTOL1A6NHN0 477 aaPredicted RBP12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 GFRA2O00451 464 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 PJA2O43164 708 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 MOCS2O96007 188 aaPredicted RBP12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 TCF4P15884 667 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 VAV2P52735 878 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 VCPP55072 806 aaKnown RBP12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 TDGQ13569 410 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 PPP2R5DQ14738 602 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 ARTNQ5T4W7 220 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 DAB2IPQ5VWQ8 1189 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 STRADAQ7RTN6 431 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 FAM217AQ8IXS0 508 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 YAF2Q8IY57 180 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 KIAA1958Q8N8K9 716 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 MYEOVQ96EZ4 313 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 MAGEB5Q9BZ81 275 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 DCLK3Q9C098 648 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 EBF3Q9H4W6 596 aa12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 THG1LQ9NWX6 298 aaKnown RBP12.58□□□□□ -0.4
RHBDF1-211ENST00000493647 DUS2Q9NX74 493 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms