RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TRAV19A0A0A6YYK7 116 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 LAMTOR5O43504 91 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 HSF2BPO75031 334 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 DAB1O75553 588 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 LTFP02788 710 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 GLI1P08151 1106 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 TARSP26639 723 aaKnown RBP14.01□□□□□ -0.17
MSH6-208ENST00000493177 SCNN1AP37088 669 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 MAGEA9P43362 315 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 SLC26A9Q7LBE3 791 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 MON1AQ86VX9 555 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 CCAR2Q8N163 923 aaKnown RBP14.01□□□□□ -0.17
MSH6-208ENST00000493177 SCML4Q8N228 414 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 C17orf53Q8N3J3 647 aaPredicted RBP14.01□□□□□ -0.17
MSH6-208ENST00000493177 EMC1Q8N766 993 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 PDZD8Q8NEN9 1154 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 JOSD2Q8TAC2 188 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 ZFYVE19Q96K21 471 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 PHOX2BQ99453 314 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 TRIM62Q9BVG3 475 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 OSBPL6Q9BZF3 934 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 POPDC2Q9HBU9 364 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 OSGEPQ9NPF4 335 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 TDP1Q9NUW8 608 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 ANAPC7Q9UJX3 599 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 PAXBP1Q9Y5B6 917 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 DUSP10Q9Y6W6 482 aa14.01□□□□□ -0.17
MSH6-208ENST00000493177 A0A0A6YYK5 440 aaPredicted RBP14□□□□□ -0.17
MSH6-208ENST00000493177 TCRBV5S1A1TA0A578 114 aa14□□□□□ -0.17
MSH6-208ENST00000493177 FAM92AA1XBS5 289 aa14□□□□□ -0.17
MSH6-208ENST00000493177 GOLGA6L9A6NEM1 432 aa14□□□□□ -0.17
MSH6-208ENST00000493177 USP27XA6NNY8 438 aa14□□□□□ -0.17
MSH6-208ENST00000493177 TMEM110-MUSTN1A8MSY1 372 aa14□□□□□ -0.17
MSH6-208ENST00000493177 BTNL10A8MVZ5 291 aa14□□□□□ -0.17
MSH6-208ENST00000493177 RALAP11233 206 aa14□□□□□ -0.17
MSH6-208ENST00000493177 NCAM1P13591 858 aa14□□□□□ -0.17
MSH6-208ENST00000493177 PDGFRAP16234 1089 aa14□□□□□ -0.17
MSH6-208ENST00000493177 DESP17661 470 aa14□□□□□ -0.17
MSH6-208ENST00000493177 GPD1P21695 349 aa14□□□□□ -0.17
MSH6-208ENST00000493177 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
MSH6-208ENST00000493177 ARHGAP25P42331 645 aa14□□□□□ -0.17
MSH6-208ENST00000493177 RPL7AP62424 266 aaKnown RBP14□□□□□ -0.17
MSH6-208ENST00000493177 YWHAZP63104 245 aaKnown RBP14□□□□□ -0.17
MSH6-208ENST00000493177 FCHO2Q0JRZ9 810 aa14□□□□□ -0.17
MSH6-208ENST00000493177 IFI16Q16666 785 aaKnown RBP14□□□□□ -0.17
MSH6-208ENST00000493177 BSPRYQ5W0U4 402 aa14□□□□□ -0.17
MSH6-208ENST00000493177 C1orf228Q6PIY5 440 aa14□□□□□ -0.17
MSH6-208ENST00000493177 RSRC2Q7L4I2 434 aaKnown RBP14□□□□□ -0.17
MSH6-208ENST00000493177 BHLHA9Q7RTU4 235 aa14□□□□□ -0.17
MSH6-208ENST00000493177 SCD5Q86SK9 330 aa14□□□□□ -0.17
MSH6-208ENST00000493177 C1orf210Q8IVY1 113 aa14□□□□□ -0.17
MSH6-208ENST00000493177 REXO1L1PQ8IX06 675 aa14□□□□□ -0.17
MSH6-208ENST00000493177 DEFB106AQ8N104 65 aa14□□□□□ -0.17
MSH6-208ENST00000493177 KIAA1524Q8TCG1 905 aa14□□□□□ -0.17
MSH6-208ENST00000493177 RNF139Q8WU17 664 aa14□□□□□ -0.17
MSH6-208ENST00000493177 RXFP2Q8WXD0 754 aa14□□□□□ -0.17
MSH6-208ENST00000493177 OVCA2Q8WZ82 227 aa14□□□□□ -0.17
MSH6-208ENST00000493177 EDEM1Q92611 657 aa14□□□□□ -0.17
MSH6-208ENST00000493177 RSPRY1Q96DX4 576 aa14□□□□□ -0.17
MSH6-208ENST00000493177 MSANTD3Q96H12 275 aa14□□□□□ -0.17
MSH6-208ENST00000493177 BTBD6Q96KE9 485 aa14□□□□□ -0.17
MSH6-208ENST00000493177 MYRFLQ96LU7 910 aa14□□□□□ -0.17
MSH6-208ENST00000493177 DDX23Q9BUQ8 820 aaKnown RBP14□□□□□ -0.17
MSH6-208ENST00000493177 C8orf33Q9H7E9 229 aaPredicted RBP14□□□□□ -0.17
MSH6-208ENST00000493177 NMUR1Q9HB89 426 aa14□□□□□ -0.17
MSH6-208ENST00000493177 TRPV5Q9NQA5 729 aa14□□□□□ -0.17
MSH6-208ENST00000493177 ABCC13Q9NSE7 274 aa14□□□□□ -0.17
MSH6-208ENST00000493177 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14□□□□□ -0.172e-7■■■■□ 21.4
MSH6-208ENST00000493177 TMEM59LQ9UK28 342 aa14□□□□□ -0.17
MSH6-208ENST00000493177 MTF2Q9Y483 593 aaPredicted RBP14□□□□□ -0.17
MSH6-208ENST00000493177 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 MYO1FO00160 1098 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 MOCS3O95396 460 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 RARGP13631 454 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 GLULP15104 373 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 PSMA2P25787 234 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 MSNP26038 577 aaKnown RBP13.99□□□□□ -0.17
MSH6-208ENST00000493177 WEE1P30291 646 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 SDC4P31431 198 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 RFC1P35251 1148 aaPredicted RBP13.99□□□□□ -0.17
MSH6-208ENST00000493177 FLT3P36888 993 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 PPP3CCP48454 512 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 PSEN1P49768 467 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 SULT1E1P49888 294 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 MESDQ14696 234 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 DCAF6Q58WW2 860 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 PPP1R15BQ5SWA1 713 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 TMEM150AQ86TG1 271 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 NACA2Q9H009 215 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 GTSE1Q9NYZ3 720 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 STAP1Q9ULZ2 295 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 NAALADL1Q9UQQ1 740 aa13.99□□□□□ -0.17
MSH6-208ENST00000493177 SYNJ2BP-COX16A0A087WUM0 186 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 TMEM191CA6NGB0 347 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 C2CD4BA6NLJ0 364 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 TADA3O75528 432 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 HDCP19113 662 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 NOS2P35228 1153 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms