RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 PHACTR1Q9C0D0 580 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ADAM7Q9H2U9 754 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 SEMA4AQ9H3S1 761 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 C11orf49Q9H6J7 331 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 WDR6Q9NNW5 1121 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 ARHGEF4Q9NR80 690 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 TMEM39AQ9NV64 488 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 DNAJC17Q9NVM6 304 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 NINJ2Q9NZG7 142 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 PAK5Q9P286 719 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 FBXW11Q9UKB1 542 aa9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 FARP1Q9Y4F1 1045 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-208ENST00000492896 HACD1B0YJ81 288 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 IRAK2O43187 625 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 CREB3O43889 395 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 MFSD11O43934 449 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 ZNF189O75820 626 aaPredicted RBP9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 ACSL3O95573 720 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 IGLV3-25P01717 112 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SHBGP04278 402 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 RBL1P28749 1068 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 GJA8P48165 433 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 CXCR3P49682 368 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 TPI1P60174 286 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SMARCB1Q12824 385 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 DPYSQ14117 519 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC29A2Q14542 456 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 TERF2Q15554 542 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 C4orf22Q6V702 233 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 ANKS3Q6ZW76 656 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 CENPUQ71F23 418 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 NUP93Q8N1F7 819 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 ARHGAP18Q8N392 663 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SCAMP5Q8TAC9 235 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SPPL2BQ8TCT7 592 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 C2orf15Q8WU43 125 aaKnown RBP9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 CPT1BQ92523 772 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 PWWP2AQ96N64 755 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 TTC25Q96NG3 672 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 PGLYRP2Q96PD5 576 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 RBM15Q96T37 977 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 TMEM109Q9BVC6 243 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 CENPHQ9H3R5 247 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SMOC2Q9H3U7 446 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 FBXO44Q9H4M3 255 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SAYSD1Q9NPB0 183 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 ABCC13Q9NSE7 274 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 TMEM51Q9NW97 253 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 ADAM21Q9UKJ8 722 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
SMARCC1-208ENST00000492896 DOCK4Q8N1I0 1966 aa9.46□□□□□ -0.89
SMARCC1-208ENST00000492896 MYO18AQ92614 2054 aaKnown RBP9.46□□□□□ -0.89
SMARCC1-208ENST00000492896 ABHD14A-ACY1A0A1B0GW23 586 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 MTMR11A4FU01 709 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 NT5C1B-RDH14C9J2C7 533 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 PPP1R12AO14974 1030 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 DCLK1O15075 740 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 EIF3HO15372 352 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 UPP2O95045 317 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 MAP3K6O95382 1288 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 TTC4O95801 387 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 IVLP07476 585 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 ABHD2P08910 425 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 NR1D1P20393 614 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 PBX3P40426 434 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 MAGEA4P43358 317 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 GPR15P49685 360 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 ARPP19P56211 112 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 ARL4CP56559 192 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 BASP1P80723 227 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 SEMA3BQ13214 749 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 PAFAH1B3Q15102 231 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 HIF1AQ16665 826 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 BRMS1LQ5PSV4 323 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 RTP2Q5QGT7 225 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 UBAP2Q5T6F2 1119 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 KCTD16Q68DU8 428 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 MSANTD2Q6P1R3 559 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 PPP1R21Q6ZMI0 780 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 RFX8Q6ZV50 586 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 PDZD4Q76G19 769 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 B4GALNT4Q76KP1 1039 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 SCD5Q86SK9 330 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 TMEM173Q86WV6 379 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 SH2D3CQ8N5H7 860 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 NAT8LQ8N9F0 302 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 UHMK1Q8TAS1 419 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 BCL7CQ8WUZ0 217 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 TFB1MQ8WVM0 346 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 RNF34Q969K3 372 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 B3GALT6Q96L58 329 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 OLFM3Q96PB7 478 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 EPAS1Q99814 870 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 TTPALQ9BTX7 342 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 MAGEB5Q9BZ81 275 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 KLC2Q9H0B6 622 aa9.46□□□□□ -0.9
SMARCC1-208ENST00000492896 TKTL2Q9H0I9 626 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms