RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 PPP1R13BQ96KQ4 1090 aa16.63■□□□□ 0.25
PKP4-214ENST00000492496 SERPINB11Q96P15 392 aa16.63■□□□□ 0.25
PKP4-214ENST00000492496 CPXM1Q96SM3 734 aa16.63■□□□□ 0.25
PKP4-214ENST00000492496 IRX2Q9BZI1 471 aaPredicted RBP16.63■□□□□ 0.25
PKP4-214ENST00000492496 POPDC2Q9HBU9 364 aa16.63■□□□□ 0.25
PKP4-214ENST00000492496 ASNSD1Q9NWL6 643 aa16.63■□□□□ 0.25
PKP4-214ENST00000492496 FBXO10Q9UK96 956 aa16.63■□□□□ 0.25
PKP4-214ENST00000492496 MMP17Q9ULZ9 603 aa16.63■□□□□ 0.25
PKP4-214ENST00000492496 CAPN9O14815 690 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 MSI1O43347 362 aaKnown RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 CHRM1P11229 460 aaPredicted RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 CDH5P33151 784 aaPredicted RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 DGKGP49619 791 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 KLK7P49862 253 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 TBX4P57082 545 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 POLR2FP61218 127 aaKnown RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 YWHAZP63104 245 aaKnown RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 SYCP1Q15431 976 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 EFHC1Q5JVL4 640 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 ADGRF1Q5T601 910 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 FYB2Q5VWT5 728 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 APTXQ7Z2E3 356 aaKnown RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 SFTPA1Q8IWL2 248 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 TMEM35BQ8NCS4 154 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 C1orf131Q8NDD1 294 aaKnown RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 DQX1Q8TE96 717 aaKnown RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 AZIN2Q96A70 460 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 ERGIC2Q96RQ1 377 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 FAM207AQ9NSI2 230 aaPredicted RBP16.62■□□□□ 0.25
PKP4-214ENST00000492496 NAALADL1Q9UQQ1 740 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 TLR6Q9Y2C9 796 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 STARD13Q9Y3M8 1113 aa16.62■□□□□ 0.25
PKP4-214ENST00000492496 CISD3P0C7P0 127 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 TIE1P35590 1138 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 ZNF165P49910 485 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 JAM2P57087 298 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 UBXN1Q04323 297 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 EOGTQ5NDL2 527 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 C10orf76Q5T2E6 689 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
PKP4-214ENST00000492496 TRMT11Q7Z4G4 463 aaKnown RBP16.61■□□□□ 0.25
PKP4-214ENST00000492496 ZNF677Q86XU0 584 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 ZDHHC17Q8IUH5 632 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 DHX40Q8IX18 779 aaKnown RBP16.61■□□□□ 0.25
PKP4-214ENST00000492496 IL17RCQ8NAC3 791 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 NEK11Q8NG66 645 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
PKP4-214ENST00000492496 DDX1Q92499 740 aaKnown RBP16.61■□□□□ 0.25
PKP4-214ENST00000492496 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 PLK2Q9NYY3 685 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 TJP2Q9UDY2 1190 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 SLC27A6Q9Y2P4 619 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 PIEZO1Q92508 2521 aa16.61■□□□□ 0.25
PKP4-214ENST00000492496 GFRA2O00451 464 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 TRIM24O15164 1050 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 APBB3O95704 486 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
PKP4-214ENST00000492496 ATP1A3P13637 1013 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 SOX5P35711 763 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 SLC11A2P49281 568 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 PTPN20Q4JDL3 420 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 MPPE1Q53F39 396 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 SYPL2Q5VXT5 272 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 TOGARAM2Q6ZUX3 1019 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 NOP9Q86U38 636 aaKnown RBP16.6■□□□□ 0.25
PKP4-214ENST00000492496 EPS8L1Q8TE68 723 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 DDI1Q8WTU0 396 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 BHMTQ93088 406 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 P2RY11Q96G91 374 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 SLC39A13Q96H72 371 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 FCRL2Q96LA5 508 aaPredicted RBP16.6■□□□□ 0.25
PKP4-214ENST00000492496 PCMTD1Q96MG8 357 aaPredicted RBP16.6■□□□□ 0.25
PKP4-214ENST00000492496 SLC2A13Q96QE2 648 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 HHIPQ96QV1 700 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 SPAG5Q96R06 1193 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 NLRC4Q9NPP4 1024 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 POLR3BQ9NW08 1133 aaPredicted RBP16.6■□□□□ 0.25
PKP4-214ENST00000492496 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
PKP4-214ENST00000492496 SMG5Q9UPR3 1016 aaKnown RBP16.6■□□□□ 0.25
PKP4-214ENST00000492496 ANTXRLA6NF34 631 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 EPHB6O15197 1021 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 IRAK2O43187 625 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 HRO43593 1189 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 ACSL4O60488 711 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 HSF2BPO75031 334 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 GFPT2O94808 682 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 KLF8O95600 359 aaPredicted RBP16.59■□□□□ 0.25
PKP4-214ENST00000492496 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 ERBB2P04626 1255 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 HOXC13P31276 330 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 STAT1P42224 750 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 GABRB2P47870 512 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 DGKEP52429 567 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 CRY1Q16526 586 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 EMC10Q5UCC4 262 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 OR6B2Q6IFH4 312 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 OLFML1Q6UWY5 402 aa16.59■□□□□ 0.25
PKP4-214ENST00000492496 FAM183BPQ6ZVS7 135 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms