RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TIMM44O43615 452 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 ZNF217O75362 1048 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CLSTN1O94985 981 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 LATS1O95835 1130 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 IGLV3-19P01714 112 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 SETSIPP0DME0 302 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 HOXB2P14652 356 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CORO1AP31146 461 aaKnown RBP8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC8A3P57103 927 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 GCNT1Q02742 428 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 EFEMP1Q12805 493 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 BECN1Q14457 450 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 GOLGA7BQ2TAP0 167 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 SGO2Q562F6 1265 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 BSPRYQ5W0U4 402 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 TMEM215Q68D42 235 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 SMYD5Q6GMV2 418 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 MSANTD2Q6P1R3 559 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC36A4Q6YBV0 504 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CYP2U1Q7Z449 544 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 TRIM59Q8IWR1 403 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 TMEFF1Q8IYR6 380 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 IRGQQ8WZA9 623 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 AZIN2Q96A70 460 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 PLD4Q96BZ4 506 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 SPACA7Q96KW9 195 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 EDEM2Q9BV94 578 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 ULBP1Q9BZM6 244 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CAPN10Q9HC96 672 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CNGB3Q9NQW8 809 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 OLA1Q9NTK5 396 aaKnown RBP8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CALCOCO1Q9P1Z2 691 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 HOOK1Q9UJC3 728 aaKnown RBP8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CLEC4EQ9ULY5 219 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 HBS1LQ9Y450 684 aaKnown RBP8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 NFE2L3Q9Y4A8 694 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 ADAMTS9Q9P2N4 1935 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 CACNA1GO43497 2377 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 MUC22E2RYF6 1773 aaPredicted RBP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 YJEFN3A6XGL0 299 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 E7ENQ6 273 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 AP5Z1O43299 807 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 NDUFV2P19404 249 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 ITPKAP23677 461 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 DHPSP49366 369 aaPredicted RBP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 DAOAP59103 153 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 ZNF445P59923 1031 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 LMAN2Q12907 356 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 NUMA1Q14980 2115 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 EIF4HQ15056 248 aaKnown RBP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 STILQ15468 1287 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 MEA1Q16626 185 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 GEN1Q17RS7 908 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 DCAF17Q5H9S7 520 aaPredicted RBP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 MPP7Q5T2T1 576 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 ADGRF1Q5T601 910 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 TCERG1LQ5VWI1 586 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 LYSMD4Q5XG99 296 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 SDE2Q6IQ49 451 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 PMF1Q6P1K2 205 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 BEND5Q7L4P6 421 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 PIP4P1Q86T03 277 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 DENND1CQ8IV53 801 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC41A1Q8IVJ1 513 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 CHPFQ8IZ52 775 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 NDRG1Q92597 394 aaKnown RBP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 PIGKQ92643 395 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 LMLNQ96KR4 655 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 HSFY1Q96LI6 401 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 LRRC4Q9HBW1 653 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 ITM2CQ9NQX7 267 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 ABCC13Q9NSE7 274 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 ELOVL2Q9NXB9 296 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 PLK2Q9NYY3 685 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 USP36Q9P275 1121 aaKnown RBP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 BCCIPQ9P287 314 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 RASAL2Q9UJF2 1139 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 STRIP2Q9ULQ0 834 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 STON1Q9Y6Q2 735 aa8.76□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC12A8A0AV02 714 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 BICDL2A1A5D9 508 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 WASH3PC4AMC7 463 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 MAP3K13O43283 966 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 GNA14O95837 355 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 FYNP06241 537 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 SERPINF2P08697 491 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 CEACAM1P13688 526 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 HOXD9P28356 352 aaPredicted RBP8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 WASP42768 502 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 RING1Q06587 406 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 ZNF33AQ06730 810 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 ADIGQ0VDE8 80 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 SEMA3BQ13214 749 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 STIM1Q13586 685 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 E2F5Q15329 346 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 DUOXA1Q1HG43 343 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 FUT11Q495W5 492 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 MPPE1Q53F39 396 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms