RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SLC6A14Q9UN76 642 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 NFE2L3Q9Y4A8 694 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 TNRC6BQ9UPQ9 1833 aaKnown RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 GON4LQ3T8J9 2241 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 A0A1W2PQF6 199 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 C4orf47A7E2U8 309 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 UPK3BL1B0FP48 263 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 UPK3BL2E5RIL1 263 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
NUP50-217ENST00000491860 SYPP08247 313 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 CISD3P0C7P0 127 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
NUP50-217ENST00000491860 CD19P15391 556 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 GNSP15586 552 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 BCKDHBP21953 392 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 OXTRP30559 389 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 CORO1AP31146 461 aaKnown RBP9.16□□□□□ -0.94
NUP50-217ENST00000491860 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
NUP50-217ENST00000491860 NOVA1P51513 510 aaKnown RBP9.16□□□□□ -0.94
NUP50-217ENST00000491860 TKTL1P51854 596 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 ARID5AQ03989 594 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 MESP2Q0VG99 397 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 GOLGA7BQ2TAP0 167 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 CCDC40Q4G0X9 1142 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 CBWD6Q4V339 395 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 TRIM61Q5EBN2 209 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 CBWD3Q5JTY5 395 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 WDR45BQ5MNZ6 344 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 CBWD5Q5RIA9 395 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 FYB2Q5VWT5 728 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 EGFLAMQ63HQ2 1017 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 LCLAT1Q6UWP7 414 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 SMYD4Q8IYR2 804 aaPredicted RBP9.16□□□□□ -0.94
NUP50-217ENST00000491860 TMEFF1Q8IYR6 380 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 WFIKKN2Q8TEU8 576 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 DDI1Q8WTU0 396 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 IRGQQ8WZA9 623 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 TATDN2Q93075 761 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 SLC35C1Q96A29 364 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 DDX50Q9BQ39 737 aaKnown RBP9.16□□□□□ -0.94
NUP50-217ENST00000491860 FBRSQ9HAH7 460 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 CALCOCO1Q9P1Z2 691 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 PILRBQ9UKJ0 227 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 INVSQ9Y283 1065 aa9.16□□□□□ -0.94
NUP50-217ENST00000491860 WDFY3Q8IZQ1 3526 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 SLC12A8A0AV02 714 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 TYW5A2RUC4 315 aaKnown RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 C1QTNF9BB2RNN3 333 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 MDM4O15151 490 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 IRAK2O43187 625 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 SYNCRIPO60506 623 aaKnown RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 FBXO21O94952 628 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 SERPINF2P08697 491 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 HOXB3P14651 431 aaPredicted RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 NDUFV2P19404 249 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 FMO5P49326 533 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 PGFP49763 221 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 MFAP3P55082 362 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 GCNT1Q02742 428 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 GFPT1Q06210 699 aaPredicted RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 ZNF33AQ06730 810 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 TRIP4Q15650 581 aaPredicted RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 CNGA2Q16280 664 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 MEA1Q16626 185 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 MPP7Q5T2T1 576 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 NUGGCQ68CJ6 796 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 TCEAL6Q6IPX3 200 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 PSAPL1Q6NUJ1 521 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 DENND1CQ8IV53 801 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 FMNL3Q8IVF7 1028 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 UNC45BQ8IWX7 931 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 FAM217AQ8IXS0 508 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 HDDC3Q8N4P3 179 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 CADM4Q8NFZ8 388 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 RLN3Q8WXF3 142 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 TCEAL3Q969E4 200 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 WBP2Q969T9 261 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 HSFY1Q96LI6 401 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 ULBP1Q9BZM6 244 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 ZDHHC5Q9C0B5 715 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 PCED1AQ9H1Q7 454 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 SMOC1Q9H4F8 434 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 PRDM16Q9HAZ2 1276 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 THAP10Q9P2Z0 257 aaPredicted RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 MBD1Q9UIS9 605 aaPredicted RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 STOML2Q9UJZ1 356 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 NUDT5Q9UKK9 219 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 AGO1Q9UL18 857 aaKnown RBP9.15□□□□□ -0.94
NUP50-217ENST00000491860 GTF3C3Q9Y5Q9 886 aa9.15□□□□□ -0.94
NUP50-217ENST00000491860 CACNA1EQ15878 2313 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 IGHV1OR15-9A0A0B4J2B8 117 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 PRRT4C9JH25 899 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 H0Y626 953 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 O00370 1275 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 MED7O43513 233 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 TRIM16O95361 564 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 KLKB1P03952 638 aa9.14□□□□□ -0.95
NUP50-217ENST00000491860 CFIP05156 583 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms