RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SLC27A6Q9Y2P4 619 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 ZBTB24O43167 697 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-220ENST00000491319 CFIP05156 583 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 ENGP17813 658 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 BST2Q10589 180 aaKnown RBP16.45■□□□□ 0.22
SMPD4-220ENST00000491319 ST3GAL2Q16842 350 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 PM20D1Q6GTS8 502 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 ISM2Q6H9L7 571 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 SLC23A3Q6PIS1 610 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 CPXM2Q8N436 756 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 UBA3Q8TBC4 463 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 LRRC4Q9HBW1 653 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 HESX1Q9UBX0 185 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 CLEC4EQ9ULY5 219 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 STON1Q9Y6Q2 735 aa16.45■□□□□ 0.22
SMPD4-220ENST00000491319 O00370 1275 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 GFRA2O00451 464 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 ZNF217O75362 1048 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 CD44P16070 742 aaKnown RBP16.44■□□□□ 0.22
SMPD4-220ENST00000491319 HOXD12P35452 270 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 DPP6P42658 865 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 IL12RB1P42701 662 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 FMO5P49326 533 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 YWHAEP62258 255 aaKnown RBP16.44■□□□□ 0.22
SMPD4-220ENST00000491319 KIAA1324Q6UXG2 1013 aaKnown RBP16.44■□□□□ 0.22
SMPD4-220ENST00000491319 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 FMNL3Q8IVF7 1028 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 PLD4Q96BZ4 506 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 PIWIL1Q96J94 861 aaKnown RBP16.44■□□□□ 0.22
SMPD4-220ENST00000491319 HSPA12BQ96MM6 686 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 TMEM131Q92545 1883 aa16.44■□□□□ 0.22
SMPD4-220ENST00000491319 YJEFN3A6XGL0 299 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 E7ENQ6 273 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 PSMA7O14818 248 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 CYBBP04839 570 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 VDRP11473 427 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 CSRP1P21291 193 aaKnown RBP16.43■□□□□ 0.22
SMPD4-220ENST00000491319 TBXAS1P24557 533 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-220ENST00000491319 STARD3Q14849 445 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 TRIP4Q15650 581 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-220ENST00000491319 DUOXA1Q1HG43 343 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 FUT11Q495W5 492 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 FAM217AQ8IXS0 508 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 SIX6OS1Q8N1H7 587 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 TRIML1Q8N9V2 468 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 DEFB124Q8NES8 71 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 DDI1Q8WTU0 396 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 TFAP2BQ92481 460 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 EDEM1Q92611 657 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 TIGD1Q96MW7 591 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 IPO9Q96P70 1041 aaKnown RBP16.43■□□□□ 0.22
SMPD4-220ENST00000491319 OLA1Q9NTK5 396 aaKnown RBP16.43■□□□□ 0.22
SMPD4-220ENST00000491319 THAP10Q9P2Z0 257 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-220ENST00000491319 SFMBT1Q9UHJ3 866 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 MAN1B1Q9UKM7 699 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 CEP295Q9C0D2 2601 aa16.43■□□□□ 0.22
SMPD4-220ENST00000491319 FRYQ5TBA9 3013 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 MSI1O43347 362 aaKnown RBP16.42■□□□□ 0.22
SMPD4-220ENST00000491319 SETSIPP0DME0 302 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 CEACAM1P13688 526 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 LCP1P13796 627 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 FOXC1Q12948 553 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 STIM1Q13586 685 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 ENPP2Q13822 863 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 ZNF234Q14588 700 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 CCDC40Q4G0X9 1142 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 PKDCCQ504Y2 493 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 BSPRYQ5W0U4 402 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 TMEM270Q6UE05 265 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 UCMAQ8WVF2 138 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 SORCS1Q8WY21 1168 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 KAT5Q92993 513 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 NT5C1BQ96P26 610 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 ZSWIM1Q9BR11 485 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 GTPBP2Q9BX10 602 aaKnown RBP16.42■□□□□ 0.22
SMPD4-220ENST00000491319 MKRN2Q9H000 416 aaKnown RBP16.42■□□□□ 0.22
SMPD4-220ENST00000491319 CAPN10Q9HC96 672 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 METTL14Q9HCE5 456 aaKnown RBP16.42■□□□□ 0.22
SMPD4-220ENST00000491319 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
SMPD4-220ENST00000491319 SLC6A14Q9UN76 642 aa16.42■□□□□ 0.22
SMPD4-220ENST00000491319 PIK3R2O00459 728 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 TSPAN3O60637 253 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 NDUFS2O75306 463 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 GABBR2O75899 941 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 CALCAP01258 141 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 SERPINF2P08697 491 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 PRKCHP24723 683 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 HOXD9P28356 352 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-220ENST00000491319 HARS2P49590 506 aaKnown RBP16.41■□□□□ 0.22
SMPD4-220ENST00000491319 RGS7P49802 495 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 DAOAP59103 153 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 NUCB2P80303 420 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 GFPT1Q06210 699 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-220ENST00000491319 BECN1Q14457 450 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 KLHL10Q6JEL2 608 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 CACUL1Q86Y37 369 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms