RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PIK3R2O00459 728 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 TEX28O15482 410 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 PSTPIP1O43586 416 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 TCEA3O75764 348 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 RB1P06400 928 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 CNPP09543 421 aaKnown RBP23.65■■□□□ 1.38
USF3-203ENST00000491165 CA8P35219 290 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 PTPN20Q4JDL3 420 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 LIN9Q5TKA1 542 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 PLPP4Q5VZY2 271 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 TLR9Q9NR96 1032 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 DNAJC17Q9NVM6 304 aaKnown RBP23.65■■□□□ 1.38
USF3-203ENST00000491165 COLQQ9Y215 455 aaPredicted RBP23.65■■□□□ 1.38
USF3-203ENST00000491165 OAS1P00973 400 aaKnown RBP23.65■■□□□ 1.38
USF3-203ENST00000491165 RALAP11233 206 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 MAP3K7CLP57077 242 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 KLF1Q13351 362 aaPredicted RBP23.65■■□□□ 1.38
USF3-203ENST00000491165 STILQ15468 1287 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 BBOF1Q8ND07 529 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 STKLD1Q8NE28 680 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 DUSP16Q9BY84 665 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 TPX2Q9ULW0 747 aaKnown RBP23.65■■□□□ 1.38
USF3-203ENST00000491165 PATJQ8NI35 1801 aa23.64■■□□□ 1.38
USF3-203ENST00000491165 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.64■■□□□ 1.37
USF3-203ENST00000491165 TCP11X1B4DZS4 312 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 RFXAPO00287 272 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 MGRN1O60291 552 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 SOAT2O75908 522 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 CXCL14O95715 111 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 NPR3P17342 541 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 RGS7P49802 495 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 BCAT1P54687 386 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 RHOT1Q8IXI2 618 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 DCP1BQ8IZD4 617 aaKnown RBP23.64■■□□□ 1.37
USF3-203ENST00000491165 TMEM35BQ8NCS4 154 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.64■■□□□ 1.37
USF3-203ENST00000491165 MAGEC3Q8TD91 643 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 GDPD5Q8WTR4 605 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 HEMGNQ9BXL5 484 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 ENTPD7Q9NQZ7 604 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 NINJ2Q9NZG7 142 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 CTNNAL1Q9UBT7 734 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 HESX1Q9UBX0 185 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 SLC27A5Q9Y2P5 690 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 NEU2Q9Y3R4 380 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 USP15Q9Y4E8 981 aaPredicted RBP23.64■■□□□ 1.37
USF3-203ENST00000491165 UNC80Q8N2C7 3258 aa23.64■■□□□ 1.37
USF3-203ENST00000491165 AP1G2O75843 785 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 LSM8O95777 96 aaKnown RBP23.63■■□□□ 1.37
USF3-203ENST00000491165 CREB1P16220 341 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 GPR15P49685 360 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 VPS41P49754 854 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 BST2Q10589 180 aaKnown RBP23.63■■□□□ 1.37
USF3-203ENST00000491165 GPM6BQ13491 265 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 CCNG2Q16589 344 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 TRIM72Q6ZMU5 477 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 SPATA2LQ8IUW3 424 aaPredicted RBP23.63■■□□□ 1.37
USF3-203ENST00000491165 CCDC89Q8N998 374 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 KCNK9Q9NPC2 374 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 FAM200BP0CF97 657 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 ELF3P78545 371 aaPredicted RBP23.63■■□□□ 1.37
USF3-203ENST00000491165 ADCY1Q08828 1119 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 MAPRE1Q15691 268 aaKnown RBP23.63■■□□□ 1.37
USF3-203ENST00000491165 DAB2IPQ5VWQ8 1189 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 GPRIN1Q7Z2K8 1008 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 CCDC63Q8NA47 563 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 TIFAQ96CG3 184 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 SMARCD1Q96GM5 515 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 SAMD11Q96NU1 681 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 NCAPGQ9BPX3 1015 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 C11orf70Q9BRQ4 267 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 RXFP1Q9HBX9 757 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 MRPL47Q9HD33 250 aaKnown RBP23.63■■□□□ 1.37
USF3-203ENST00000491165 FGFR1OP2Q9NVK5 253 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 IRAK3Q9Y616 596 aa23.63■■□□□ 1.37
USF3-203ENST00000491165 C2orf71A6NGG8 1288 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 MMP8P22894 467 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 SMAD3P84022 425 aaKnown RBP23.62■■□□□ 1.37
USF3-203ENST00000491165 CYP4A22Q5TCH4 519 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 PIGZQ86VD9 579 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 KATNAL2Q8IYT4 538 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 ANKRD42Q8N9B4 389 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 CSNK1G1Q9HCP0 422 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 ABCF3Q9NUQ8 709 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 LGALS13Q9UHV8 139 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 F8VP50 259 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 ABLIM3O94929 683 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 BRAFP15056 766 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 GSCP56915 257 aaPredicted RBP23.62■■□□□ 1.37
USF3-203ENST00000491165 UBE3AQ05086 875 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 DUSP4Q13115 394 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 NFE2Q16621 373 aaPredicted RBP23.62■■□□□ 1.37
USF3-203ENST00000491165 PREPLQ4J6C6 727 aaPredicted RBP23.62■■□□□ 1.37
USF3-203ENST00000491165 FAM133BQ5BKY9 247 aaKnown RBP23.62■■□□□ 1.37
USF3-203ENST00000491165 SDHAF4Q5VUM1 108 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 HIBCHQ6NVY1 386 aaPredicted RBP23.62■■□□□ 1.37
USF3-203ENST00000491165 C4orf50Q6ZRC1 276 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 MRPL43Q8N983 215 aaKnown RBP23.62■■□□□ 1.37
USF3-203ENST00000491165 OSBPL8Q9BZF1 889 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 ADAM22Q9P0K1 906 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms