RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 NCANO14594 1321 aa7.97□□□□□ -1.13
CLDN1-202ENST00000490800 ATP8B3O60423 1300 aa7.97□□□□□ -1.13
CLDN1-202ENST00000490800 KIF2AO00139 706 aaPredicted RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 FANCGO15287 622 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 MAN1A2O60476 641 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 CILPO75339 1184 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 H2AFZP0C0S5 128 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 HAPLN1P10915 354 aaPredicted RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ATF6P18850 670 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 GNA15P30679 374 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 PNPLA4P41247 253 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 MAGEA9P43362 315 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 RPS9P46781 194 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 EIF1AXP47813 144 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 RAD23BP54727 409 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ETF1P62495 437 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 INCA1Q0VD86 236 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 KIF5AQ12840 1032 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 MTAPQ13126 283 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 TAF12Q16514 161 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 CLEC16AQ2KHT3 1053 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ZNF528Q3MIS6 628 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 SV2CQ496J9 727 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 GPR158Q5T848 1215 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ZC3H14Q6PJT7 736 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 H2AFVQ71UI9 128 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 LIMS2Q7Z4I7 341 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ITIH5Q86UX2 942 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 DCP1BQ8IZD4 617 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 TXLNBQ8N3L3 684 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 DCLK2Q8N568 766 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 TTC8Q8TAM2 541 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 SPPL2BQ8TCT7 592 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 CSGALNACT1Q8TDX6 532 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 IFT43Q96FT9 208 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ZNF560Q96MR9 790 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 TWNKQ96RR1 684 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ZSWIM1Q9BR11 485 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 MRPL45Q9BRJ2 306 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 SLC46A2Q9BY10 475 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 TSGA10Q9BZW7 698 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ELOVL4Q9GZR5 314 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 FAM124BQ9H5Z6 455 aaPredicted RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 GPAMQ9HCL2 828 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 LUC7LQ9NQ29 371 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 SEPT11Q9NVA2 429 aaKnown RBP7.96□□□□□ -1.14
CLDN1-202ENST00000490800 TMLHEQ9NVH6 421 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 GDAP2Q9NXN4 497 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 ZDHHC3Q9NYG2 299 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 HMGXB4Q9UGU5 601 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 INTUQ9ULD6 942 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 GUCA1BQ9UMX6 200 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 SNX9Q9Y5X1 595 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 PIAS3Q9Y6X2 628 aa7.96□□□□□ -1.14
CLDN1-202ENST00000490800 RIF1Q5UIP0 2472 aaKnown RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 WDR87Q6ZQQ6 2873 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SLC38A8A6NNN8 435 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 BTNL10A8MVZ5 291 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 TMCO5BA8MYB1 307 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ARNTLO00327 626 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 CHADO15335 359 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 THAP12O43422 761 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 KRT86O43790 486 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 KIF5CO60282 957 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 HUS1O60921 280 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 RTN2O75298 545 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 FGF19O95750 216 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 TUBB4AP04350 444 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 CYP1A1P04798 512 aaPredicted RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 PAEPP09466 180 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 GZMAP12544 262 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ACAT1P24752 427 aaKnown RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 BRD2P25440 801 aaKnown RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SOX9P48436 509 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 GPR15P49685 360 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 KPNA1P52294 538 aaPredicted RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 NDST1P52848 882 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 GALCP54803 685 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 GNG11P61952 73 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 CYP4F8P98187 520 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 FCHO2Q0JRZ9 810 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SMARCB1Q12824 385 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ORC1Q13415 861 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 VEPH1Q14D04 833 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SOWAHAQ2M3V2 549 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 C11orf91Q3C1V1 193 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ZNF394Q53GI3 561 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ARHGAP15Q53QZ3 475 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ARSJQ5FYB0 599 aaPredicted RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SYT10Q6XYQ8 523 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ATCAYQ86WG3 371 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ETFBKMTQ8IXQ9 262 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 PDCL2Q8N4E4 241 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 TTC39CQ8N584 583 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SUMF1Q8NBK3 374 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SLC4A11Q8NBS3 891 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 C2orf15Q8WU43 125 aaKnown RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ZNF606Q8WXB4 792 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 TFAP2BQ92481 460 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms